Experiment: Cobalt chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_921 and Pf6N2E2_922 are separated by 51 nucleotides Pf6N2E2_922 and Pf6N2E2_923 are separated by 78 nucleotides
Pf6N2E2_921 - putative nucleoside-diphosphate-sugar epimerase, at 1,085,305 to 1,086,186
_921
Pf6N2E2_922 - FIG00794167: hypothetical protein, at 1,086,238 to 1,086,699
_922
Pf6N2E2_923 - Haloacid dehalogenase, type II (EC 3.8.1.2), at 1,086,778 to 1,087,095
_923
Position (kb)
1085
1086
1087 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1084.372 kb on - strand at 1084.408 kb on - strand at 1084.408 kb on - strand at 1084.459 kb on + strand at 1084.463 kb on - strand at 1084.497 kb on - strand at 1084.497 kb on - strand at 1084.498 kb on + strand at 1084.499 kb on - strand at 1084.513 kb on + strand at 1084.514 kb on - strand at 1084.514 kb on - strand at 1084.514 kb on - strand at 1084.518 kb on + strand at 1084.628 kb on + strand at 1084.632 kb on + strand at 1084.632 kb on + strand at 1084.633 kb on - strand at 1084.633 kb on - strand at 1084.636 kb on + strand at 1084.637 kb on - strand at 1084.801 kb on + strand at 1084.802 kb on - strand at 1084.828 kb on + strand at 1084.914 kb on + strand at 1084.914 kb on + strand at 1084.914 kb on + strand at 1084.928 kb on - strand at 1085.095 kb on + strand at 1085.096 kb on - strand at 1085.096 kb on - strand at 1085.100 kb on - strand at 1085.100 kb on - strand at 1085.116 kb on + strand at 1085.116 kb on + strand at 1085.116 kb on + strand at 1085.116 kb on + strand at 1085.116 kb on + strand at 1085.117 kb on - strand at 1085.117 kb on - strand at 1085.117 kb on - strand at 1085.119 kb on + strand at 1085.120 kb on - strand at 1085.163 kb on + strand at 1085.163 kb on + strand at 1085.163 kb on + strand at 1085.163 kb on + strand at 1085.163 kb on + strand at 1085.163 kb on + strand at 1085.164 kb on - strand at 1085.164 kb on - strand at 1085.164 kb on - strand at 1085.164 kb on - strand at 1085.274 kb on + strand at 1085.274 kb on + strand at 1085.274 kb on + strand at 1085.274 kb on + strand at 1085.274 kb on + strand at 1085.274 kb on + strand at 1085.274 kb on + strand at 1085.275 kb on - strand at 1085.275 kb on - strand at 1085.275 kb on - strand at 1085.275 kb on - strand at 1085.298 kb on + strand at 1085.327 kb on + strand at 1085.376 kb on + strand at 1085.376 kb on + strand at 1085.401 kb on + strand, within Pf6N2E2_921 at 1085.401 kb on + strand, within Pf6N2E2_921 at 1085.401 kb on + strand, within Pf6N2E2_921 at 1085.402 kb on - strand, within Pf6N2E2_921 at 1085.487 kb on + strand, within Pf6N2E2_921 at 1085.488 kb on - strand, within Pf6N2E2_921 at 1085.522 kb on - strand, within Pf6N2E2_921 at 1085.566 kb on + strand, within Pf6N2E2_921 at 1085.567 kb on - strand, within Pf6N2E2_921 at 1085.829 kb on + strand, within Pf6N2E2_921 at 1085.889 kb on + strand, within Pf6N2E2_921 at 1085.889 kb on + strand, within Pf6N2E2_921 at 1085.896 kb on + strand, within Pf6N2E2_921 at 1086.009 kb on + strand, within Pf6N2E2_921 at 1086.009 kb on + strand, within Pf6N2E2_921 at 1086.009 kb on + strand, within Pf6N2E2_921 at 1086.009 kb on + strand, within Pf6N2E2_921 at 1086.009 kb on + strand, within Pf6N2E2_921 at 1086.009 kb on + strand, within Pf6N2E2_921 at 1086.025 kb on + strand, within Pf6N2E2_921 at 1086.025 kb on + strand, within Pf6N2E2_921 at 1086.025 kb on + strand, within Pf6N2E2_921 at 1086.047 kb on + strand, within Pf6N2E2_921 at 1086.047 kb on + strand, within Pf6N2E2_921 at 1086.047 kb on + strand, within Pf6N2E2_921 at 1086.076 kb on + strand, within Pf6N2E2_921 at 1086.110 kb on + strand at 1086.110 kb on + strand at 1086.110 kb on + strand at 1086.111 kb on - strand at 1086.178 kb on + strand at 1086.178 kb on + strand at 1086.178 kb on + strand at 1086.178 kb on + strand at 1086.219 kb on + strand at 1086.322 kb on + strand, within Pf6N2E2_922 at 1086.322 kb on + strand, within Pf6N2E2_922 at 1086.364 kb on + strand, within Pf6N2E2_922 at 1086.364 kb on + strand, within Pf6N2E2_922 at 1086.467 kb on + strand, within Pf6N2E2_922 at 1086.467 kb on + strand, within Pf6N2E2_922 at 1086.779 kb on + strand at 1086.808 kb on + strand at 1086.808 kb on + strand at 1086.845 kb on + strand, within Pf6N2E2_923 at 1086.846 kb on - strand, within Pf6N2E2_923 at 1086.855 kb on - strand, within Pf6N2E2_923 at 1086.855 kb on - strand, within Pf6N2E2_923 at 1087.016 kb on + strand, within Pf6N2E2_923 at 1087.025 kb on - strand, within Pf6N2E2_923 at 1087.118 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.6 mM remove 1,084,372 - -1.0 1,084,408 - -1.7 1,084,408 - -0.7 1,084,459 + -1.7 1,084,463 - -0.6 1,084,497 - -0.6 1,084,497 - -0.8 1,084,498 + -1.9 1,084,499 - -1.7 1,084,513 + +2.2 1,084,514 - +0.9 1,084,514 - -0.1 1,084,514 - +0.6 1,084,518 + -1.2 1,084,628 + -1.4 1,084,632 + -0.2 1,084,632 + -0.4 1,084,633 - -0.4 1,084,633 - -1.0 1,084,636 + +1.6 1,084,637 - -0.4 1,084,801 + -1.0 1,084,802 - +2.6 1,084,828 + -2.0 1,084,914 + +1.2 1,084,914 + +0.6 1,084,914 + +1.2 1,084,928 - -0.4 1,085,095 + +0.9 1,085,096 - +1.3 1,085,096 - +1.6 1,085,100 - -0.4 1,085,100 - +0.6 1,085,116 + -1.1 1,085,116 + +0.4 1,085,116 + +0.0 1,085,116 + -1.0 1,085,116 + +2.6 1,085,117 - +0.0 1,085,117 - -2.0 1,085,117 - +1.6 1,085,119 + -0.7 1,085,120 - -0.2 1,085,163 + +2.2 1,085,163 + -0.1 1,085,163 + +0.6 1,085,163 + +0.2 1,085,163 + +2.2 1,085,163 + +0.8 1,085,164 - +1.0 1,085,164 - +0.2 1,085,164 - -1.4 1,085,164 - -1.1 1,085,274 + +0.8 1,085,274 + +0.2 1,085,274 + +2.2 1,085,274 + +0.3 1,085,274 + -1.0 1,085,274 + +0.6 1,085,274 + -1.2 1,085,275 - +1.2 1,085,275 - -0.6 1,085,275 - -0.8 1,085,275 - -0.8 1,085,298 + +0.6 1,085,327 + -0.9 1,085,376 + -0.4 1,085,376 + +2.3 1,085,401 + Pf6N2E2_921 0.11 +0.6 1,085,401 + Pf6N2E2_921 0.11 +1.0 1,085,401 + Pf6N2E2_921 0.11 -0.2 1,085,402 - Pf6N2E2_921 0.11 -1.4 1,085,487 + Pf6N2E2_921 0.21 -0.4 1,085,488 - Pf6N2E2_921 0.21 +0.6 1,085,522 - Pf6N2E2_921 0.25 +0.6 1,085,566 + Pf6N2E2_921 0.30 +1.3 1,085,567 - Pf6N2E2_921 0.30 -0.4 1,085,829 + Pf6N2E2_921 0.59 +0.9 1,085,889 + Pf6N2E2_921 0.66 +1.6 1,085,889 + Pf6N2E2_921 0.66 -1.5 1,085,896 + Pf6N2E2_921 0.67 +2.2 1,086,009 + Pf6N2E2_921 0.80 -0.4 1,086,009 + Pf6N2E2_921 0.80 +1.0 1,086,009 + Pf6N2E2_921 0.80 -0.2 1,086,009 + Pf6N2E2_921 0.80 +0.9 1,086,009 + Pf6N2E2_921 0.80 +0.8 1,086,009 + Pf6N2E2_921 0.80 +1.0 1,086,025 + Pf6N2E2_921 0.82 +0.2 1,086,025 + Pf6N2E2_921 0.82 +0.8 1,086,025 + Pf6N2E2_921 0.82 +0.8 1,086,047 + Pf6N2E2_921 0.84 +0.3 1,086,047 + Pf6N2E2_921 0.84 +0.0 1,086,047 + Pf6N2E2_921 0.84 -0.2 1,086,076 + Pf6N2E2_921 0.87 +0.6 1,086,110 + +0.0 1,086,110 + -1.0 1,086,110 + -0.3 1,086,111 - +1.6 1,086,178 + -0.4 1,086,178 + -1.4 1,086,178 + -1.4 1,086,178 + +0.6 1,086,219 + +0.4 1,086,322 + Pf6N2E2_922 0.18 -0.4 1,086,322 + Pf6N2E2_922 0.18 +0.3 1,086,364 + Pf6N2E2_922 0.27 -1.0 1,086,364 + Pf6N2E2_922 0.27 +0.6 1,086,467 + Pf6N2E2_922 0.50 +0.0 1,086,467 + Pf6N2E2_922 0.50 -0.4 1,086,779 + +1.0 1,086,808 + -1.0 1,086,808 + -0.4 1,086,845 + Pf6N2E2_923 0.21 +0.6 1,086,846 - Pf6N2E2_923 0.21 +1.0 1,086,855 - Pf6N2E2_923 0.24 -1.0 1,086,855 - Pf6N2E2_923 0.24 +1.2 1,087,016 + Pf6N2E2_923 0.75 +0.6 1,087,025 - Pf6N2E2_923 0.78 -1.0 1,087,118 - +2.6
Or see this region's nucleotide sequence