Experiment: Cobalt chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_869 and Pf6N2E2_870 are separated by 182 nucleotides Pf6N2E2_870 and Pf6N2E2_871 overlap by 4 nucleotides Pf6N2E2_871 and Pf6N2E2_872 overlap by 17 nucleotides
Pf6N2E2_869 - FMN oxidoreductase, at 1,017,501 to 1,018,619
_869
Pf6N2E2_870 - DNA-binding response regulator, at 1,018,802 to 1,019,533
_870
Pf6N2E2_871 - sensor histidine kinase, at 1,019,530 to 1,020,912
_871
Pf6N2E2_872 - TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins, at 1,020,896 to 1,022,863
_872
Position (kb)
1019
1020
1021 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1018.603 kb on + strand at 1018.666 kb on + strand at 1018.666 kb on + strand at 1018.666 kb on + strand at 1018.666 kb on + strand at 1018.667 kb on - strand at 1018.667 kb on - strand at 1018.667 kb on - strand at 1018.667 kb on - strand at 1018.667 kb on - strand at 1018.667 kb on - strand at 1018.667 kb on - strand at 1018.667 kb on - strand at 1018.708 kb on - strand at 1018.732 kb on + strand at 1018.754 kb on + strand at 1018.755 kb on - strand at 1019.137 kb on - strand, within Pf6N2E2_870 at 1019.217 kb on - strand, within Pf6N2E2_870 at 1019.320 kb on - strand, within Pf6N2E2_870 at 1019.320 kb on - strand, within Pf6N2E2_870 at 1019.320 kb on - strand, within Pf6N2E2_870 at 1019.409 kb on + strand, within Pf6N2E2_870 at 1019.409 kb on + strand, within Pf6N2E2_870 at 1019.410 kb on - strand, within Pf6N2E2_870 at 1019.410 kb on - strand, within Pf6N2E2_870 at 1019.476 kb on + strand at 1019.610 kb on + strand at 1019.610 kb on + strand at 1019.611 kb on - strand at 1019.611 kb on - strand at 1020.031 kb on + strand, within Pf6N2E2_871 at 1020.032 kb on - strand, within Pf6N2E2_871 at 1020.055 kb on + strand, within Pf6N2E2_871 at 1020.055 kb on + strand, within Pf6N2E2_871 at 1020.055 kb on + strand, within Pf6N2E2_871 at 1020.055 kb on + strand, within Pf6N2E2_871 at 1020.055 kb on + strand, within Pf6N2E2_871 at 1020.055 kb on + strand, within Pf6N2E2_871 at 1020.056 kb on - strand, within Pf6N2E2_871 at 1020.056 kb on - strand, within Pf6N2E2_871 at 1020.056 kb on - strand, within Pf6N2E2_871 at 1020.056 kb on - strand, within Pf6N2E2_871 at 1020.056 kb on - strand at 1020.309 kb on + strand, within Pf6N2E2_871 at 1020.479 kb on + strand, within Pf6N2E2_871 at 1020.897 kb on + strand at 1020.897 kb on + strand at 1020.898 kb on - strand at 1020.936 kb on + strand at 1020.936 kb on + strand at 1020.937 kb on - strand at 1020.937 kb on - strand at 1020.937 kb on - strand at 1020.951 kb on + strand at 1020.952 kb on - strand at 1021.026 kb on + strand at 1021.026 kb on + strand at 1021.027 kb on - strand at 1021.027 kb on - strand at 1021.102 kb on - strand, within Pf6N2E2_872 at 1021.104 kb on + strand, within Pf6N2E2_872 at 1021.104 kb on + strand, within Pf6N2E2_872 at 1021.104 kb on + strand, within Pf6N2E2_872 at 1021.104 kb on + strand, within Pf6N2E2_872 at 1021.104 kb on + strand, within Pf6N2E2_872 at 1021.105 kb on - strand, within Pf6N2E2_872 at 1021.233 kb on + strand, within Pf6N2E2_872 at 1021.233 kb on + strand, within Pf6N2E2_872 at 1021.233 kb on + strand, within Pf6N2E2_872 at 1021.234 kb on - strand, within Pf6N2E2_872 at 1021.239 kb on + strand, within Pf6N2E2_872 at 1021.239 kb on + strand, within Pf6N2E2_872 at 1021.239 kb on + strand, within Pf6N2E2_872 at 1021.239 kb on + strand, within Pf6N2E2_872 at 1021.240 kb on - strand, within Pf6N2E2_872 at 1021.240 kb on - strand, within Pf6N2E2_872 at 1021.341 kb on + strand, within Pf6N2E2_872 at 1021.342 kb on - strand, within Pf6N2E2_872 at 1021.398 kb on + strand, within Pf6N2E2_872 at 1021.398 kb on + strand, within Pf6N2E2_872 at 1021.398 kb on + strand, within Pf6N2E2_872 at 1021.399 kb on - strand, within Pf6N2E2_872 at 1021.458 kb on + strand, within Pf6N2E2_872 at 1021.530 kb on + strand, within Pf6N2E2_872 at 1021.650 kb on + strand, within Pf6N2E2_872 at 1021.650 kb on + strand, within Pf6N2E2_872 at 1021.756 kb on - strand, within Pf6N2E2_872 at 1021.899 kb on + strand, within Pf6N2E2_872 at 1021.899 kb on + strand, within Pf6N2E2_872 at 1021.899 kb on + strand, within Pf6N2E2_872 at 1021.903 kb on + strand, within Pf6N2E2_872
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.6 mM remove 1,018,603 + -1.4 1,018,666 + +0.6 1,018,666 + +0.0 1,018,666 + -0.6 1,018,666 + -0.0 1,018,667 - -0.4 1,018,667 - -0.8 1,018,667 - -1.3 1,018,667 - +0.1 1,018,667 - -0.1 1,018,667 - +2.0 1,018,667 - +0.6 1,018,667 - -0.4 1,018,708 - -1.5 1,018,732 + +1.6 1,018,754 + -1.4 1,018,755 - -1.2 1,019,137 - Pf6N2E2_870 0.46 +0.2 1,019,217 - Pf6N2E2_870 0.57 +0.0 1,019,320 - Pf6N2E2_870 0.71 +1.1 1,019,320 - Pf6N2E2_870 0.71 +0.1 1,019,320 - Pf6N2E2_870 0.71 -1.0 1,019,409 + Pf6N2E2_870 0.83 -1.6 1,019,409 + Pf6N2E2_870 0.83 +0.9 1,019,410 - Pf6N2E2_870 0.83 -1.7 1,019,410 - Pf6N2E2_870 0.83 +0.6 1,019,476 + -0.2 1,019,610 + +0.6 1,019,610 + -1.9 1,019,611 - -3.1 1,019,611 - +1.4 1,020,031 + Pf6N2E2_871 0.36 -0.6 1,020,032 - Pf6N2E2_871 0.36 +0.4 1,020,055 + Pf6N2E2_871 0.38 +1.2 1,020,055 + Pf6N2E2_871 0.38 -1.7 1,020,055 + Pf6N2E2_871 0.38 -0.7 1,020,055 + Pf6N2E2_871 0.38 -1.0 1,020,055 + Pf6N2E2_871 0.38 +0.4 1,020,055 + Pf6N2E2_871 0.38 -1.0 1,020,056 - Pf6N2E2_871 0.38 -1.4 1,020,056 - Pf6N2E2_871 0.38 -0.6 1,020,056 - Pf6N2E2_871 0.38 -0.4 1,020,056 - Pf6N2E2_871 0.38 +1.0 1,020,056 - +0.6 1,020,309 + Pf6N2E2_871 0.56 -2.0 1,020,479 + Pf6N2E2_871 0.69 -1.5 1,020,897 + +0.6 1,020,897 + +1.2 1,020,898 - +0.2 1,020,936 + -0.1 1,020,936 + -1.0 1,020,937 - +0.8 1,020,937 - +0.3 1,020,937 - +0.6 1,020,951 + -0.3 1,020,952 - +0.2 1,021,026 + +2.9 1,021,026 + -0.1 1,021,027 - -0.4 1,021,027 - +0.6 1,021,102 - Pf6N2E2_872 0.10 +1.6 1,021,104 + Pf6N2E2_872 0.11 -0.4 1,021,104 + Pf6N2E2_872 0.11 +0.3 1,021,104 + Pf6N2E2_872 0.11 -0.3 1,021,104 + Pf6N2E2_872 0.11 +1.9 1,021,104 + Pf6N2E2_872 0.11 +0.6 1,021,105 - Pf6N2E2_872 0.11 -0.2 1,021,233 + Pf6N2E2_872 0.17 -0.9 1,021,233 + Pf6N2E2_872 0.17 -1.5 1,021,233 + Pf6N2E2_872 0.17 +2.2 1,021,234 - Pf6N2E2_872 0.17 -0.8 1,021,239 + Pf6N2E2_872 0.17 +1.2 1,021,239 + Pf6N2E2_872 0.17 +0.0 1,021,239 + Pf6N2E2_872 0.17 -1.0 1,021,239 + Pf6N2E2_872 0.17 -0.4 1,021,240 - Pf6N2E2_872 0.17 +0.6 1,021,240 - Pf6N2E2_872 0.17 -1.0 1,021,341 + Pf6N2E2_872 0.23 +2.9 1,021,342 - Pf6N2E2_872 0.23 -1.0 1,021,398 + Pf6N2E2_872 0.26 -0.2 1,021,398 + Pf6N2E2_872 0.26 +1.7 1,021,398 + Pf6N2E2_872 0.26 +0.4 1,021,399 - Pf6N2E2_872 0.26 -1.2 1,021,458 + Pf6N2E2_872 0.29 +0.4 1,021,530 + Pf6N2E2_872 0.32 +0.6 1,021,650 + Pf6N2E2_872 0.38 -1.2 1,021,650 + Pf6N2E2_872 0.38 +0.0 1,021,756 - Pf6N2E2_872 0.44 -0.4 1,021,899 + Pf6N2E2_872 0.51 +1.6 1,021,899 + Pf6N2E2_872 0.51 -2.2 1,021,899 + Pf6N2E2_872 0.51 +0.5 1,021,903 + Pf6N2E2_872 0.51 +0.1
Or see this region's nucleotide sequence