Experiment: Cobalt chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4981 and Pf6N2E2_4982 are separated by 362 nucleotides Pf6N2E2_4982 and Pf6N2E2_4983 are separated by 8 nucleotides Pf6N2E2_4983 and Pf6N2E2_4984 overlap by 8 nucleotides
Pf6N2E2_4981 - Nitrogen regulation protein NR(I), at 5,747,068 to 5,748,975
_4981
Pf6N2E2_4982 - UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-), at 5,749,338 to 5,750,687
_4982
Pf6N2E2_4983 - 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC 4.1.1.-), at 5,750,696 to 5,751,331
_4983
Pf6N2E2_4984 - Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1), at 5,751,324 to 5,751,608
_4984
Position (kb)
5749
5750
5751 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 5748.538 kb on + strand, within Pf6N2E2_4981 at 5748.538 kb on + strand, within Pf6N2E2_4981 at 5748.538 kb on + strand, within Pf6N2E2_4981 at 5748.538 kb on + strand, within Pf6N2E2_4981 at 5748.538 kb on + strand, within Pf6N2E2_4981 at 5748.539 kb on - strand, within Pf6N2E2_4981 at 5748.539 kb on - strand, within Pf6N2E2_4981 at 5748.539 kb on - strand, within Pf6N2E2_4981 at 5748.539 kb on - strand, within Pf6N2E2_4981 at 5748.539 kb on - strand, within Pf6N2E2_4981 at 5748.717 kb on + strand, within Pf6N2E2_4981 at 5748.717 kb on + strand, within Pf6N2E2_4981 at 5748.717 kb on + strand, within Pf6N2E2_4981 at 5748.717 kb on + strand, within Pf6N2E2_4981 at 5748.718 kb on - strand, within Pf6N2E2_4981 at 5748.930 kb on + strand at 5748.978 kb on + strand at 5748.978 kb on + strand at 5748.978 kb on + strand at 5748.979 kb on - strand at 5748.979 kb on - strand at 5748.979 kb on - strand at 5749.147 kb on + strand at 5749.147 kb on + strand at 5749.147 kb on + strand at 5749.147 kb on + strand at 5749.147 kb on + strand at 5749.148 kb on - strand at 5749.148 kb on - strand at 5749.148 kb on - strand at 5749.148 kb on - strand at 5749.249 kb on + strand at 5749.249 kb on + strand at 5749.250 kb on - strand at 5749.250 kb on - strand at 5749.250 kb on - strand at 5749.250 kb on - strand at 5749.250 kb on - strand at 5749.250 kb on - strand at 5749.250 kb on - strand at 5749.250 kb on - strand at 5749.268 kb on + strand at 5749.268 kb on + strand at 5749.268 kb on + strand at 5749.268 kb on + strand at 5749.268 kb on + strand at 5749.269 kb on - strand at 5749.269 kb on - strand at 5749.269 kb on - strand at 5749.269 kb on - strand at 5749.269 kb on - strand at 5749.269 kb on - strand at 5749.269 kb on - strand at 5749.303 kb on + strand at 5749.325 kb on + strand at 5749.349 kb on + strand at 5749.349 kb on + strand at 5749.349 kb on + strand at 5749.575 kb on + strand, within Pf6N2E2_4982 at 5749.575 kb on + strand, within Pf6N2E2_4982 at 5749.575 kb on + strand, within Pf6N2E2_4982 at 5749.599 kb on + strand, within Pf6N2E2_4982 at 5749.599 kb on + strand, within Pf6N2E2_4982 at 5750.174 kb on + strand, within Pf6N2E2_4982 at 5750.312 kb on + strand, within Pf6N2E2_4982 at 5750.312 kb on + strand, within Pf6N2E2_4982 at 5750.312 kb on + strand, within Pf6N2E2_4982 at 5750.312 kb on + strand, within Pf6N2E2_4982 at 5750.312 kb on + strand, within Pf6N2E2_4982 at 5750.312 kb on + strand, within Pf6N2E2_4982 at 5750.316 kb on + strand, within Pf6N2E2_4982 at 5750.316 kb on + strand, within Pf6N2E2_4982 at 5750.316 kb on + strand, within Pf6N2E2_4982 at 5750.579 kb on + strand at 5751.329 kb on + strand at 5751.329 kb on + strand at 5751.330 kb on - strand at 5751.330 kb on - strand at 5751.330 kb on - strand at 5751.330 kb on - strand at 5751.420 kb on + strand, within Pf6N2E2_4984 at 5751.445 kb on - strand, within Pf6N2E2_4984 at 5751.445 kb on - strand, within Pf6N2E2_4984 at 5751.445 kb on - strand, within Pf6N2E2_4984 at 5751.606 kb on + strand at 5751.634 kb on + strand at 5751.634 kb on + strand at 5751.634 kb on + strand at 5751.634 kb on + strand at 5751.635 kb on - strand at 5751.635 kb on - strand at 5751.635 kb on - strand at 5751.635 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.6 mM remove 5,748,538 + Pf6N2E2_4981 0.77 +0.7 5,748,538 + Pf6N2E2_4981 0.77 +0.8 5,748,538 + Pf6N2E2_4981 0.77 -0.9 5,748,538 + Pf6N2E2_4981 0.77 -0.5 5,748,538 + Pf6N2E2_4981 0.77 +0.0 5,748,539 - Pf6N2E2_4981 0.77 +0.2 5,748,539 - Pf6N2E2_4981 0.77 -0.4 5,748,539 - Pf6N2E2_4981 0.77 -0.6 5,748,539 - Pf6N2E2_4981 0.77 +1.1 5,748,539 - Pf6N2E2_4981 0.77 -0.1 5,748,717 + Pf6N2E2_4981 0.86 +1.2 5,748,717 + Pf6N2E2_4981 0.86 +0.5 5,748,717 + Pf6N2E2_4981 0.86 -0.1 5,748,717 + Pf6N2E2_4981 0.86 -0.1 5,748,718 - Pf6N2E2_4981 0.86 +0.0 5,748,930 + -2.1 5,748,978 + -0.6 5,748,978 + -0.5 5,748,978 + +0.1 5,748,979 - +0.7 5,748,979 - -0.0 5,748,979 - +0.6 5,749,147 + -0.6 5,749,147 + +0.2 5,749,147 + +0.2 5,749,147 + -0.1 5,749,147 + +0.2 5,749,148 - +0.4 5,749,148 - -1.1 5,749,148 - +0.4 5,749,148 - -0.3 5,749,249 + +1.2 5,749,249 + +0.1 5,749,250 - -2.8 5,749,250 - +0.1 5,749,250 - -1.2 5,749,250 - -0.6 5,749,250 - -0.6 5,749,250 - -0.7 5,749,250 - -0.3 5,749,250 - -0.8 5,749,268 + +0.6 5,749,268 + +1.0 5,749,268 + +0.6 5,749,268 + +1.5 5,749,268 + -0.6 5,749,269 - -0.6 5,749,269 - -0.6 5,749,269 - +0.4 5,749,269 - -0.3 5,749,269 - +0.1 5,749,269 - +1.2 5,749,269 - +1.2 5,749,303 + -0.0 5,749,325 + +0.2 5,749,349 + -0.2 5,749,349 + -1.2 5,749,349 + -0.0 5,749,575 + Pf6N2E2_4982 0.18 +1.2 5,749,575 + Pf6N2E2_4982 0.18 +0.1 5,749,575 + Pf6N2E2_4982 0.18 -1.3 5,749,599 + Pf6N2E2_4982 0.19 +0.2 5,749,599 + Pf6N2E2_4982 0.19 +1.2 5,750,174 + Pf6N2E2_4982 0.62 +1.7 5,750,312 + Pf6N2E2_4982 0.72 -1.6 5,750,312 + Pf6N2E2_4982 0.72 -0.3 5,750,312 + Pf6N2E2_4982 0.72 -1.1 5,750,312 + Pf6N2E2_4982 0.72 -1.6 5,750,312 + Pf6N2E2_4982 0.72 -1.3 5,750,312 + Pf6N2E2_4982 0.72 -0.8 5,750,316 + Pf6N2E2_4982 0.72 -0.5 5,750,316 + Pf6N2E2_4982 0.72 -1.1 5,750,316 + Pf6N2E2_4982 0.72 -0.3 5,750,579 + +0.2 5,751,329 + -0.3 5,751,329 + +0.9 5,751,330 - -0.1 5,751,330 - +0.8 5,751,330 - -0.5 5,751,330 - +0.1 5,751,420 + Pf6N2E2_4984 0.34 +0.2 5,751,445 - Pf6N2E2_4984 0.42 -0.3 5,751,445 - Pf6N2E2_4984 0.42 +0.3 5,751,445 - Pf6N2E2_4984 0.42 -0.8 5,751,606 + -0.1 5,751,634 + +0.8 5,751,634 + +1.2 5,751,634 + -1.9 5,751,634 + -0.9 5,751,635 - +0.2 5,751,635 - +0.8 5,751,635 - +0.1 5,751,635 - +0.1
Or see this region's nucleotide sequence