Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_718 and Pf6N2E2_719 are separated by 88 nucleotides Pf6N2E2_719 and Pf6N2E2_720 overlap by 4 nucleotides Pf6N2E2_720 and Pf6N2E2_721 are separated by 81 nucleotides
Pf6N2E2_718 - Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5), at 822,406 to 823,053
_718
Pf6N2E2_719 - Molybdenum cofactor biosynthesis protein MoaB, at 823,142 to 823,696
_719
Pf6N2E2_720 - Molybdopterin biosynthesis protein MoeA, at 823,693 to 824,928
_720
Pf6N2E2_721 - FIG139552: Putative protease, at 825,010 to 826,005
_721
Position (kb) 823
824
825 Strain fitness (log2 ratio) -1
0
1 at 822.732 kb on - strand, within Pf6N2E2_718 at 822.732 kb on - strand, within Pf6N2E2_718 at 822.732 kb on - strand, within Pf6N2E2_718 at 822.782 kb on - strand, within Pf6N2E2_718 at 823.067 kb on + strand at 823.067 kb on + strand at 823.067 kb on + strand at 823.068 kb on - strand at 823.068 kb on - strand at 823.084 kb on - strand at 823.193 kb on - strand at 823.303 kb on + strand, within Pf6N2E2_719 at 823.308 kb on - strand, within Pf6N2E2_719 at 823.886 kb on - strand, within Pf6N2E2_720 at 824.228 kb on - strand, within Pf6N2E2_720 at 824.228 kb on - strand, within Pf6N2E2_720 at 824.308 kb on + strand, within Pf6N2E2_720 at 824.308 kb on + strand, within Pf6N2E2_720 at 824.309 kb on - strand, within Pf6N2E2_720 at 824.309 kb on - strand, within Pf6N2E2_720 at 824.325 kb on + strand, within Pf6N2E2_720 at 824.688 kb on - strand, within Pf6N2E2_720 at 824.743 kb on + strand, within Pf6N2E2_720 at 824.743 kb on + strand, within Pf6N2E2_720 at 824.747 kb on + strand, within Pf6N2E2_720 at 824.747 kb on + strand, within Pf6N2E2_720 at 824.899 kb on + strand at 825.082 kb on + strand at 825.082 kb on + strand at 825.082 kb on + strand at 825.082 kb on + strand at 825.082 kb on + strand at 825.082 kb on + strand at 825.082 kb on + strand at 825.083 kb on - strand at 825.083 kb on - strand at 825.193 kb on + strand, within Pf6N2E2_721 at 825.193 kb on + strand, within Pf6N2E2_721 at 825.193 kb on + strand, within Pf6N2E2_721 at 825.207 kb on + strand, within Pf6N2E2_721 at 825.208 kb on - strand, within Pf6N2E2_721 at 825.208 kb on - strand, within Pf6N2E2_721 at 825.357 kb on - strand, within Pf6N2E2_721 at 825.550 kb on + strand, within Pf6N2E2_721 at 825.550 kb on + strand, within Pf6N2E2_721 at 825.551 kb on - strand, within Pf6N2E2_721 at 825.551 kb on - strand, within Pf6N2E2_721 at 825.551 kb on - strand, within Pf6N2E2_721 at 825.551 kb on - strand, within Pf6N2E2_721 at 825.668 kb on - strand, within Pf6N2E2_721 at 825.847 kb on + strand, within Pf6N2E2_721 at 825.847 kb on + strand, within Pf6N2E2_721 at 825.847 kb on + strand, within Pf6N2E2_721 at 825.848 kb on - strand, within Pf6N2E2_721 at 825.848 kb on - strand, within Pf6N2E2_721
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1 mM remove 822,732 - Pf6N2E2_718 0.50 +0.2 822,732 - Pf6N2E2_718 0.50 +0.7 822,732 - Pf6N2E2_718 0.50 -1.0 822,782 - Pf6N2E2_718 0.58 +0.6 823,067 + +0.6 823,067 + +0.6 823,067 + -0.1 823,068 - -1.0 823,068 - -0.4 823,084 - -1.0 823,193 - +0.6 823,303 + Pf6N2E2_719 0.29 +1.1 823,308 - Pf6N2E2_719 0.30 -0.8 823,886 - Pf6N2E2_720 0.16 -0.4 824,228 - Pf6N2E2_720 0.43 -1.0 824,228 - Pf6N2E2_720 0.43 +1.6 824,308 + Pf6N2E2_720 0.50 -0.9 824,308 + Pf6N2E2_720 0.50 -0.4 824,309 - Pf6N2E2_720 0.50 +0.3 824,309 - Pf6N2E2_720 0.50 +0.3 824,325 + Pf6N2E2_720 0.51 -0.9 824,688 - Pf6N2E2_720 0.81 -1.0 824,743 + Pf6N2E2_720 0.85 +0.4 824,743 + Pf6N2E2_720 0.85 +0.2 824,747 + Pf6N2E2_720 0.85 +0.2 824,747 + Pf6N2E2_720 0.85 +0.3 824,899 + -0.4 825,082 + -0.1 825,082 + +0.6 825,082 + +0.1 825,082 + +1.4 825,082 + -0.1 825,082 + -0.0 825,082 + -0.8 825,083 - +0.8 825,083 - -1.4 825,193 + Pf6N2E2_721 0.18 -1.0 825,193 + Pf6N2E2_721 0.18 -0.2 825,193 + Pf6N2E2_721 0.18 -0.6 825,207 + Pf6N2E2_721 0.20 +1.1 825,208 - Pf6N2E2_721 0.20 -1.7 825,208 - Pf6N2E2_721 0.20 -1.7 825,357 - Pf6N2E2_721 0.35 +0.7 825,550 + Pf6N2E2_721 0.54 -0.1 825,550 + Pf6N2E2_721 0.54 -0.4 825,551 - Pf6N2E2_721 0.54 +0.8 825,551 - Pf6N2E2_721 0.54 -1.4 825,551 - Pf6N2E2_721 0.54 +0.8 825,551 - Pf6N2E2_721 0.54 +0.4 825,668 - Pf6N2E2_721 0.66 -1.5 825,847 + Pf6N2E2_721 0.84 -0.0 825,847 + Pf6N2E2_721 0.84 +0.2 825,847 + Pf6N2E2_721 0.84 -0.2 825,848 - Pf6N2E2_721 0.84 +0.3 825,848 - Pf6N2E2_721 0.84 +0.0
Or see this region's nucleotide sequence