Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5954 and Pf6N2E2_5955 overlap by 1 nucleotides Pf6N2E2_5955 and Pf6N2E2_5956 are separated by 18 nucleotides
Pf6N2E2_5954 - 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179), at 6,773,211 to 6,774,419
_5954
Pf6N2E2_5955 - Aminodeoxychorismate lyase (EC 4.1.3.38), at 6,774,419 to 6,775,234
_5955
Pf6N2E2_5956 - FIG004453: protein YceG like, at 6,775,253 to 6,776,398
_5956
Position (kb)
6774
6775
6776 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6773.646 kb on + strand, within Pf6N2E2_5954 at 6774.156 kb on + strand, within Pf6N2E2_5954 at 6774.626 kb on + strand, within Pf6N2E2_5955 at 6774.627 kb on - strand, within Pf6N2E2_5955 at 6774.894 kb on - strand, within Pf6N2E2_5955 at 6774.894 kb on - strand, within Pf6N2E2_5955 at 6774.916 kb on + strand, within Pf6N2E2_5955 at 6774.916 kb on + strand, within Pf6N2E2_5955 at 6774.917 kb on - strand, within Pf6N2E2_5955 at 6774.917 kb on - strand, within Pf6N2E2_5955 at 6775.032 kb on + strand, within Pf6N2E2_5955 at 6775.033 kb on - strand, within Pf6N2E2_5955 at 6775.246 kb on + strand at 6775.454 kb on + strand, within Pf6N2E2_5956 at 6775.454 kb on + strand, within Pf6N2E2_5956 at 6775.568 kb on + strand, within Pf6N2E2_5956 at 6775.729 kb on + strand, within Pf6N2E2_5956 at 6775.733 kb on + strand, within Pf6N2E2_5956 at 6775.733 kb on + strand, within Pf6N2E2_5956 at 6775.733 kb on + strand, within Pf6N2E2_5956 at 6775.841 kb on + strand, within Pf6N2E2_5956 at 6775.841 kb on + strand, within Pf6N2E2_5956 at 6775.843 kb on + strand, within Pf6N2E2_5956 at 6775.843 kb on + strand, within Pf6N2E2_5956 at 6775.985 kb on + strand, within Pf6N2E2_5956 at 6776.057 kb on + strand, within Pf6N2E2_5956 at 6776.057 kb on + strand, within Pf6N2E2_5956 at 6776.057 kb on + strand, within Pf6N2E2_5956 at 6776.057 kb on + strand, within Pf6N2E2_5956 at 6776.150 kb on + strand, within Pf6N2E2_5956
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1 mM remove 6,773,646 + Pf6N2E2_5954 0.36 +1.0 6,774,156 + Pf6N2E2_5954 0.78 +1.0 6,774,626 + Pf6N2E2_5955 0.25 +0.5 6,774,627 - Pf6N2E2_5955 0.25 -0.6 6,774,894 - Pf6N2E2_5955 0.58 +1.0 6,774,894 - Pf6N2E2_5955 0.58 -0.6 6,774,916 + Pf6N2E2_5955 0.61 -0.6 6,774,916 + Pf6N2E2_5955 0.61 -0.6 6,774,917 - Pf6N2E2_5955 0.61 +1.0 6,774,917 - Pf6N2E2_5955 0.61 -1.4 6,775,032 + Pf6N2E2_5955 0.75 -1.0 6,775,033 - Pf6N2E2_5955 0.75 +1.0 6,775,246 + +0.5 6,775,454 + Pf6N2E2_5956 0.18 +0.2 6,775,454 + Pf6N2E2_5956 0.18 -0.5 6,775,568 + Pf6N2E2_5956 0.27 -0.5 6,775,729 + Pf6N2E2_5956 0.42 +0.6 6,775,733 + Pf6N2E2_5956 0.42 +1.0 6,775,733 + Pf6N2E2_5956 0.42 +1.0 6,775,733 + Pf6N2E2_5956 0.42 +1.7 6,775,841 + Pf6N2E2_5956 0.51 +2.5 6,775,841 + Pf6N2E2_5956 0.51 +0.5 6,775,843 + Pf6N2E2_5956 0.51 +0.2 6,775,843 + Pf6N2E2_5956 0.51 -0.2 6,775,985 + Pf6N2E2_5956 0.64 +1.0 6,776,057 + Pf6N2E2_5956 0.70 -0.4 6,776,057 + Pf6N2E2_5956 0.70 +1.0 6,776,057 + Pf6N2E2_5956 0.70 +0.8 6,776,057 + Pf6N2E2_5956 0.70 -1.9 6,776,150 + Pf6N2E2_5956 0.78 +0.5
Or see this region's nucleotide sequence