Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5640

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
6,453,960	+		Pf6N2E2_5639	0.46	+0.2
6,454,469	-		Pf6N2E2_5639	0.77	-0.3
6,454,512	+		Pf6N2E2_5639	0.80	-0.1
6,454,512	+		Pf6N2E2_5639	0.80	+1.6
6,454,513	-		Pf6N2E2_5639	0.80	-0.1
6,454,513	-		Pf6N2E2_5639	0.80	-0.5
6,454,741	+				-0.4
6,454,741	+				+0.2
6,454,827	+				-0.1
6,454,828	-				-0.4
6,454,855	+				+0.6
6,454,862	-				-0.1
6,455,012	+		Pf6N2E2_5640	0.31	-1.3
6,455,013	-		Pf6N2E2_5640	0.31	-0.2
6,455,199	+				+0.5
6,455,260	+				-2.3
6,455,289	+				+1.0
6,455,289	+				+0.2
6,455,290	-				-0.4
6,455,300	+				+0.4
6,455,300	+				+0.5
6,455,351	+				-0.3
6,455,405	+				-1.0
6,455,406	-				+1.8
6,455,495	+		Pf6N2E2_5641	0.11	-0.2
6,455,495	+		Pf6N2E2_5641	0.11	+0.2
6,455,495	+		Pf6N2E2_5641	0.11	+0.0
6,455,496	-		Pf6N2E2_5641	0.11	-0.8
6,455,496	-		Pf6N2E2_5641	0.11	-0.5
6,455,529	-		Pf6N2E2_5641	0.14	+0.3
6,455,562	-		Pf6N2E2_5641	0.16	-0.4
6,455,681	+		Pf6N2E2_5641	0.25	+1.8
6,455,681	+		Pf6N2E2_5641	0.25	-0.3
6,455,682	-		Pf6N2E2_5641	0.25	-0.5
6,455,682	-		Pf6N2E2_5641	0.25	+0.7
6,455,682	-		Pf6N2E2_5641	0.25	-1.5
6,455,684	+		Pf6N2E2_5641	0.25	+0.0
6,455,684	+		Pf6N2E2_5641	0.25	+0.8
6,455,685	-		Pf6N2E2_5641	0.25	+0.7
6,455,982	-		Pf6N2E2_5641	0.48	-0.3
6,455,982	-		Pf6N2E2_5641	0.48	+0.8
6,455,982	-		Pf6N2E2_5641	0.48	-0.1
6,455,982	-		Pf6N2E2_5641	0.48	-0.6
6,455,982	-		Pf6N2E2_5641	0.48	-0.3
6,456,160	-		Pf6N2E2_5641	0.61	-0.1