Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5387

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
6,190,665	+		Pf6N2E2_5386	0.19	-1.1
6,191,004	+		Pf6N2E2_5386	0.48	+0.7
6,191,057	+		Pf6N2E2_5386	0.53	+0.1
6,191,057	+		Pf6N2E2_5386	0.53	+0.9
6,191,057	+		Pf6N2E2_5386	0.53	+0.3
6,191,057	+		Pf6N2E2_5386	0.53	+0.3
6,191,057	+		Pf6N2E2_5386	0.53	+0.6
6,191,057	+		Pf6N2E2_5386	0.53	-1.3
6,191,057	+		Pf6N2E2_5386	0.53	-0.5
6,191,057	+		Pf6N2E2_5386	0.53	+0.8
6,191,057	+		Pf6N2E2_5386	0.53	-0.5
6,191,058	-		Pf6N2E2_5386	0.53	+0.3
6,191,058	-		Pf6N2E2_5386	0.53	+0.2
6,191,058	-		Pf6N2E2_5386	0.53	-0.8
6,191,058	-		Pf6N2E2_5386	0.53	-0.2
6,191,058	-		Pf6N2E2_5386	0.53	-1.3
6,191,058	-		Pf6N2E2_5386	0.53	-0.2
6,191,067	-		Pf6N2E2_5386	0.54	-0.5
6,191,345	+		Pf6N2E2_5386	0.77	-0.0
6,191,346	-		Pf6N2E2_5386	0.77	-0.2
6,191,417	+		Pf6N2E2_5386	0.83	+0.1
6,191,418	-		Pf6N2E2_5386	0.84	-0.4
6,191,506	-				-1.6
6,191,584	+				-1.2
6,191,584	+				+0.4
6,191,584	+				+2.1
6,191,585	-				+0.1
6,191,585	-				+0.2
6,191,585	-				-0.1
6,191,624	+				-0.2
6,191,625	-				-1.6
6,191,628	+				-0.7
6,191,628	+				+2.1
6,191,628	+				+0.1
6,191,629	-				-0.2
6,191,629	-				-1.9
6,191,806	+		Pf6N2E2_5387	0.11	-0.5
6,191,806	+		Pf6N2E2_5387	0.11	-0.8
6,191,806	+		Pf6N2E2_5387	0.11	-0.1
6,191,806	+		Pf6N2E2_5387	0.11	+0.1
6,191,806	+		Pf6N2E2_5387	0.11	+0.1
6,191,806	+		Pf6N2E2_5387	0.11	-1.7
6,191,806	+		Pf6N2E2_5387	0.11	-0.3
6,191,806	+		Pf6N2E2_5387	0.11	+0.5
6,191,806	+		Pf6N2E2_5387	0.11	+1.2
6,191,806	+		Pf6N2E2_5387	0.11	-1.2
6,191,807	-		Pf6N2E2_5387	0.11	+0.3
6,191,807	-		Pf6N2E2_5387	0.11	-0.5
6,191,807	-		Pf6N2E2_5387	0.11	-0.6
6,191,807	-		Pf6N2E2_5387	0.11	+0.6
6,191,839	+		Pf6N2E2_5387	0.13	+1.1
6,191,840	-		Pf6N2E2_5387	0.13	-0.5
6,191,840	-		Pf6N2E2_5387	0.13	-1.1
6,191,842	+		Pf6N2E2_5387	0.13	-0.0
6,191,935	+		Pf6N2E2_5387	0.20	+0.4
6,191,935	+		Pf6N2E2_5387	0.20	-1.2
6,191,936	-		Pf6N2E2_5387	0.20	-1.9
6,191,936	-		Pf6N2E2_5387	0.20	-0.2
6,191,959	+		Pf6N2E2_5387	0.21	+0.3
6,191,959	+		Pf6N2E2_5387	0.21	+0.5
6,191,959	+		Pf6N2E2_5387	0.21	+0.8
6,191,960	-		Pf6N2E2_5387	0.21	+0.1
6,192,196	+		Pf6N2E2_5387	0.37	+0.1
6,192,196	+		Pf6N2E2_5387	0.37	-0.7
6,192,196	+		Pf6N2E2_5387	0.37	+1.4
6,192,196	+		Pf6N2E2_5387	0.37	-0.3
6,192,196	+		Pf6N2E2_5387	0.37	-0.1
6,192,196	+		Pf6N2E2_5387	0.37	-0.5
6,192,196	+		Pf6N2E2_5387	0.37	+0.6
6,192,196	+		Pf6N2E2_5387	0.37	+0.7
6,192,196	+		Pf6N2E2_5387	0.37	-0.7
6,192,196	+		Pf6N2E2_5387	0.37	+0.5
6,192,196	+		Pf6N2E2_5387	0.37	-0.9
6,192,196	+		Pf6N2E2_5387	0.37	-0.7
6,192,197	-		Pf6N2E2_5387	0.37	-0.7
6,192,454	+		Pf6N2E2_5387	0.55	-0.5
6,192,455	-		Pf6N2E2_5387	0.55	+1.1
6,192,580	-		Pf6N2E2_5387	0.63	-1.1
6,192,629	-		Pf6N2E2_5387	0.66	-0.3
6,192,808	+		Pf6N2E2_5387	0.78	+0.9
6,192,809	-		Pf6N2E2_5387	0.78	-0.1
6,192,859	+		Pf6N2E2_5387	0.82	-0.9
6,192,859	+		Pf6N2E2_5387	0.82	-0.2
6,192,859	+		Pf6N2E2_5387	0.82	-0.5
6,192,860	-		Pf6N2E2_5387	0.82	-0.1
6,192,860	-		Pf6N2E2_5387	0.82	-0.3
6,192,860	-		Pf6N2E2_5387	0.82	-0.1
6,192,860	-		Pf6N2E2_5387	0.82	-0.6
6,192,898	-		Pf6N2E2_5387	0.84	-0.9
6,192,928	+		Pf6N2E2_5387	0.87	+0.1
6,192,928	+		Pf6N2E2_5387	0.87	+2.0
6,192,928	+		Pf6N2E2_5387	0.87	-0.7
6,192,928	+		Pf6N2E2_5387	0.87	+0.5
6,192,928	+		Pf6N2E2_5387	0.87	-0.3
6,192,929	-		Pf6N2E2_5387	0.87	-0.8
6,192,929	-		Pf6N2E2_5387	0.87	+0.5
6,192,974	-		Pf6N2E2_5387	0.90	-0.7
6,193,068	+				+0.9
6,193,069	-				+0.4
6,193,069	-				+3.1
6,193,069	-				+0.9
6,193,069	-				+0.7
6,193,078	+				+1.3
6,193,079	-				-0.3
6,193,127	+				+0.1
6,193,127	+				-0.5
6,193,127	+				-0.6
6,193,128	-				+0.1
6,193,128	-				+0.5
6,193,144	+				-1.2
6,193,145	-				-0.6
6,193,229	+				+1.1
6,193,229	+				-0.1
6,193,230	-				+0.9
6,193,230	-				+1.5
6,193,316	-				-0.2
6,193,442	+		Pf6N2E2_5388	0.16	+0.9
6,193,442	+		Pf6N2E2_5388	0.16	-0.0
6,193,442	+		Pf6N2E2_5388	0.16	+0.6
6,193,442	+		Pf6N2E2_5388	0.16	+0.9
6,193,443	-		Pf6N2E2_5388	0.16	+1.0
6,193,443	-		Pf6N2E2_5388	0.16	-1.7
6,193,443	-		Pf6N2E2_5388	0.16	-0.4
6,193,472	+		Pf6N2E2_5388	0.19	+0.2
6,193,473	-		Pf6N2E2_5388	0.19	+0.2
6,193,473	-		Pf6N2E2_5388	0.19	-0.9
6,193,473	-		Pf6N2E2_5388	0.19	-0.1
6,193,490	+		Pf6N2E2_5388	0.20	-0.5
6,193,490	+		Pf6N2E2_5388	0.20	+1.1
6,193,490	+		Pf6N2E2_5388	0.20	-0.5
6,193,491	-		Pf6N2E2_5388	0.20	+0.1
6,193,537	+		Pf6N2E2_5388	0.23	-0.2
6,193,537	+		Pf6N2E2_5388	0.23	-0.5
6,193,537	+		Pf6N2E2_5388	0.23	+0.5
6,193,538	-		Pf6N2E2_5388	0.24	+0.4
6,193,538	-		Pf6N2E2_5388	0.24	+0.5
6,193,712	+		Pf6N2E2_5388	0.37	+0.5
6,193,713	-		Pf6N2E2_5388	0.37	-0.2
6,193,775	+		Pf6N2E2_5388	0.42	+1.1
6,193,775	+		Pf6N2E2_5388	0.42	-0.4
6,193,775	+		Pf6N2E2_5388	0.42	-0.6
6,193,775	+		Pf6N2E2_5388	0.42	+0.2
6,193,775	+		Pf6N2E2_5388	0.42	+2.7
6,193,775	+		Pf6N2E2_5388	0.42	+1.0
6,193,775	+		Pf6N2E2_5388	0.42	+0.8
6,193,776	-		Pf6N2E2_5388	0.42	-0.3
6,193,776	-		Pf6N2E2_5388	0.42	-0.5
6,193,776	-		Pf6N2E2_5388	0.42	-0.7
6,193,776	-		Pf6N2E2_5388	0.42	-1.8
6,193,776	-		Pf6N2E2_5388	0.42	-0.7
6,193,776	-		Pf6N2E2_5388	0.42	-0.5
6,193,776	-		Pf6N2E2_5388	0.42	+0.1
6,193,778	+		Pf6N2E2_5388	0.42	+2.7
6,193,778	+		Pf6N2E2_5388	0.42	+0.7
6,193,778	+		Pf6N2E2_5388	0.42	-0.2
6,193,778	+		Pf6N2E2_5388	0.42	-1.2
6,193,779	-		Pf6N2E2_5388	0.42	-0.3
6,193,913	+		Pf6N2E2_5388	0.52	+1.1
6,193,914	-		Pf6N2E2_5388	0.52	-0.4
6,193,914	-		Pf6N2E2_5388	0.52	-0.8
6,193,914	-		Pf6N2E2_5388	0.52	-0.9
6,193,914	-		Pf6N2E2_5388	0.52	-0.6
6,193,973	+		Pf6N2E2_5388	0.57	+0.4