Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3321

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
3,835,964	+		Pf6N2E2_3319	0.58	-0.9
3,835,964	+		Pf6N2E2_3319	0.58	+0.7
3,835,964	+		Pf6N2E2_3319	0.58	+0.4
3,835,965	-		Pf6N2E2_3319	0.58	+0.0
3,835,965	-		Pf6N2E2_3319	0.58	+0.1
3,835,965	-		Pf6N2E2_3319	0.58	+1.0
3,836,200	+		Pf6N2E2_3319	0.73	-1.7
3,836,200	+		Pf6N2E2_3319	0.73	+0.3
3,836,200	+		Pf6N2E2_3319	0.73	+0.2
3,836,201	-		Pf6N2E2_3319	0.73	-0.1
3,836,271	-		Pf6N2E2_3319	0.77	-0.2
3,836,293	+		Pf6N2E2_3319	0.79	+0.8
3,836,293	+		Pf6N2E2_3319	0.79	-0.2
3,836,293	+		Pf6N2E2_3319	0.79	+0.8
3,836,294	-		Pf6N2E2_3319	0.79	+0.4
3,836,294	-		Pf6N2E2_3319	0.79	-0.4
3,836,294	-		Pf6N2E2_3319	0.79	-0.1
3,836,414	-		Pf6N2E2_3319	0.86	+0.6
3,836,461	-		Pf6N2E2_3319	0.89	+0.5
3,836,529	+				+2.2
3,836,529	+				-0.3
3,836,529	+				+0.4
3,836,529	+				+1.2
3,836,529	+				-1.8
3,836,529	+				+1.2
3,836,529	+				-0.4
3,836,529	+				+2.4
3,836,529	+				-1.4
3,836,530	-				-0.7
3,836,530	-				-1.5
3,836,530	-				-0.1
3,836,530	-				+0.2
3,836,530	-				-0.8
3,836,530	-				-0.2
3,836,611	+				+0.4
3,836,612	-				-2.4
3,836,650	+				+0.0
3,836,650	+				-0.3
3,836,651	-				+0.8
3,836,654	+				+0.2
3,836,654	+				+0.2
3,836,654	+				+0.3
3,836,654	+				-0.5
3,836,654	+				-0.4
3,836,654	+				+0.5
3,836,654	+				-0.3
3,836,654	+				+0.7
3,836,655	-				-1.1
3,836,655	-				-0.8
3,836,655	-				-0.1
3,836,676	+		Pf6N2E2_3320	0.17	-0.0
3,836,677	-		Pf6N2E2_3320	0.18	-2.5
3,836,706	-		Pf6N2E2_3320	0.42	-0.4
3,836,731	-		Pf6N2E2_3320	0.63	-0.3
3,836,731	-		Pf6N2E2_3320	0.63	+0.2
3,836,781	-				-0.2
3,836,781	-				-0.1
3,836,781	-				+1.2
3,836,850	+				+2.2
3,836,850	+				+0.9
3,836,851	-				+0.1
3,836,851	-				-0.4
3,836,851	-				-1.4
3,836,851	-				-0.2
3,836,851	-				-0.8
3,836,893	-				-0.5
3,836,991	-		Pf6N2E2_3321	0.17	+1.2
3,837,092	+		Pf6N2E2_3321	0.28	-0.6
3,837,159	-		Pf6N2E2_3321	0.35	-0.8
3,837,206	+		Pf6N2E2_3321	0.40	-1.1
3,837,207	-		Pf6N2E2_3321	0.40	-2.0
3,837,207	-		Pf6N2E2_3321	0.40	-0.6
3,837,330	+		Pf6N2E2_3321	0.53	-1.2
3,837,331	-		Pf6N2E2_3321	0.53	-0.5
3,837,331	-		Pf6N2E2_3321	0.53	+0.5
3,837,361	-		Pf6N2E2_3321	0.56	-2.0
3,837,481	-		Pf6N2E2_3321	0.68	-1.6
3,837,481	-		Pf6N2E2_3321	0.68	-0.6
3,837,536	-		Pf6N2E2_3321	0.74	-1.4
3,837,678	-		Pf6N2E2_3321	0.89	-0.8
3,837,714	+				-0.6
3,837,715	-				+2.8
3,837,790	+				-0.5
3,837,790	+				-1.3
3,837,965	+				-0.2
3,837,965	+				-1.7
3,837,966	-				+2.0
3,838,248	-				+0.4
3,838,307	+				-0.4
3,838,308	+				+0.4
3,838,308	-				-0.4
3,838,429	+		Pf6N2E2_3322	0.12	-1.8
3,838,429	+		Pf6N2E2_3322	0.12	-0.7
3,838,474	+		Pf6N2E2_3322	0.13	-0.1
3,838,475	-		Pf6N2E2_3322	0.13	+0.1
3,838,475	-		Pf6N2E2_3322	0.13	+0.9
3,838,475	-		Pf6N2E2_3322	0.13	-0.4
3,838,475	-		Pf6N2E2_3322	0.13	-0.3
3,838,475	-		Pf6N2E2_3322	0.13	+1.2
3,838,531	+		Pf6N2E2_3322	0.14	-1.2
3,838,531	+		Pf6N2E2_3322	0.14	-1.6
3,838,532	-		Pf6N2E2_3322	0.14	-0.1
3,838,540	+		Pf6N2E2_3322	0.14	-0.6
3,838,591	+		Pf6N2E2_3322	0.15	+1.2
3,838,592	-		Pf6N2E2_3322	0.15	+0.7
3,838,592	-		Pf6N2E2_3322	0.15	-1.0
3,838,654	+		Pf6N2E2_3322	0.16	+0.2
3,838,654	+		Pf6N2E2_3322	0.16	-0.6
3,838,654	+		Pf6N2E2_3322	0.16	+1.2
3,838,655	-		Pf6N2E2_3322	0.16	-3.5
3,838,655	-		Pf6N2E2_3322	0.16	-0.7
3,838,769	-		Pf6N2E2_3322	0.18	-0.4
3,838,769	-		Pf6N2E2_3322	0.18	-2.0
3,838,769	-		Pf6N2E2_3322	0.18	+0.2
3,838,769	-		Pf6N2E2_3322	0.18	-1.4