Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2732

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
3,223,011	+		Pf6N2E2_2730	0.67	+0.1
3,223,011	+		Pf6N2E2_2730	0.67	+0.3
3,223,012	-		Pf6N2E2_2730	0.67	+1.9
3,223,041	+		Pf6N2E2_2730	0.69	+1.1
3,223,041	+		Pf6N2E2_2730	0.69	-2.6
3,223,044	+		Pf6N2E2_2730	0.69	+0.2
3,223,044	+		Pf6N2E2_2730	0.69	+0.3
3,223,044	+		Pf6N2E2_2730	0.69	+1.3
3,223,058	+		Pf6N2E2_2730	0.70	+0.6
3,223,086	+		Pf6N2E2_2730	0.73	+0.5
3,223,174	+		Pf6N2E2_2730	0.79	+0.9
3,223,174	+		Pf6N2E2_2730	0.79	+1.6
3,223,175	-		Pf6N2E2_2730	0.79	+1.0
3,223,175	-		Pf6N2E2_2730	0.79	+0.3
3,223,175	-		Pf6N2E2_2730	0.79	+0.3
3,223,175	-		Pf6N2E2_2730	0.79	+1.1
3,223,175	-		Pf6N2E2_2730	0.79	+0.3
3,223,201	-		Pf6N2E2_2730	0.81	+0.2
3,223,285	+		Pf6N2E2_2730	0.87	+3.6
3,223,478	-		Pf6N2E2_2731	0.42	-0.1
3,223,555	+				+1.0
3,223,555	+				+0.0
3,223,555	+				+0.6
3,223,555	+				+1.4
3,223,555	+				+1.2
3,223,556	-				-0.6
3,223,556	-				+1.1
3,223,556	-				+0.2
3,223,556	-				+2.0
3,223,556	-				+1.6
3,223,556	-				+0.5
3,223,558	+				+2.2
3,223,558	+				-0.4
3,223,559	-				+1.0
3,223,564	+				+1.3
3,223,565	-				-0.3
3,223,565	-				-0.1
3,223,565	-				+0.6
3,223,811	+				+1.5
3,223,811	+				+1.0
3,223,812	-				-0.9
3,223,817	+				+1.4
3,223,858	+				+1.0
3,223,859	-				-1.5
3,223,859	-				-0.9
3,223,863	+				+2.6
3,223,863	+				+0.2
3,223,863	+				+0.9
3,223,863	+				+0.9
3,223,863	+				+1.3
3,223,863	+				+0.0
3,223,864	-				-1.2
3,223,864	-				+1.0
3,223,864	-				-0.3
3,224,113	+		Pf6N2E2_2732	0.14	+1.7
3,224,114	-		Pf6N2E2_2732	0.14	-0.2
3,224,154	-		Pf6N2E2_2732	0.18	-0.8
3,224,154	-		Pf6N2E2_2732	0.18	-1.6
3,224,188	+		Pf6N2E2_2732	0.22	+0.3
3,224,188	+		Pf6N2E2_2732	0.22	+0.0
3,224,188	+		Pf6N2E2_2732	0.22	+1.0
3,224,188	+		Pf6N2E2_2732	0.22	-2.0
3,224,189	-		Pf6N2E2_2732	0.22	-1.5
3,224,189	-		Pf6N2E2_2732	0.22	-1.4
3,224,189	-		Pf6N2E2_2732	0.22	+1.6
3,224,206	+		Pf6N2E2_2732	0.23	-1.3
3,224,207	-		Pf6N2E2_2732	0.24	-0.8
3,224,207	-		Pf6N2E2_2732	0.24	-0.6
3,224,298	+		Pf6N2E2_2732	0.33	-0.4
3,224,299	-		Pf6N2E2_2732	0.33	+0.5
3,224,315	-		Pf6N2E2_2732	0.35	+0.0
3,224,692	+		Pf6N2E2_2732	0.76	-0.6
3,224,692	+		Pf6N2E2_2732	0.76	-1.0
3,224,693	-		Pf6N2E2_2732	0.76	+1.0
3,224,693	-		Pf6N2E2_2732	0.76	-0.3
3,224,693	-		Pf6N2E2_2732	0.76	+0.0
3,224,693	-		Pf6N2E2_2732	0.76	+1.0
3,224,949	-				+3.3
3,225,266	+				-1.3
3,225,266	+				+2.6
3,225,266	+				+0.0
3,225,266	+				-0.6
3,225,267	-				-1.0
3,225,267	-				-1.6
3,225,267	-				-1.0
3,225,311	+				+1.0
3,225,312	-				+0.0
3,225,342	+				+0.4
3,225,353	+				+1.0
3,225,401	+				-1.3
3,225,401	+				+1.2
3,225,572	-		Pf6N2E2_2734	0.19	-0.3
3,225,573	+		Pf6N2E2_2734	0.20	+1.6
3,225,574	-		Pf6N2E2_2734	0.20	+0.4
3,225,744	+		Pf6N2E2_2734	0.38	+1.6
3,225,745	-		Pf6N2E2_2734	0.38	-1.1