Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1215

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
1,419,512	+				+0.7
1,419,512	+				+0.1
1,419,542	+				-0.7
1,419,542	+				+1.1
1,419,542	+				-2.1
1,419,542	+				+1.5
1,419,542	+				-0.3
1,419,543	-				+1.2
1,419,543	-				+0.1
1,419,543	-				-0.9
1,419,585	+				-1.1
1,419,586	-				-0.5
1,419,688	+		Pf6N2E2_1213	0.13	+2.1
1,419,688	+		Pf6N2E2_1213	0.13	-0.4
1,419,688	+		Pf6N2E2_1213	0.13	+0.3
1,419,689	-		Pf6N2E2_1213	0.14	+2.1
1,419,689	-		Pf6N2E2_1213	0.14	-0.2
1,420,157	-		Pf6N2E2_1214	0.70	+0.9
1,420,276	+				+0.5
1,420,277	-				+1.2
1,420,277	-				+0.7
1,420,277	-				-0.3
1,420,528	+				+1.0
1,420,528	+				+1.3
1,420,528	+				+0.1
1,420,529	-				+1.0
1,420,529	-				+0.3
1,420,529	-				-1.3
1,420,529	-				-0.4
1,420,560	+		Pf6N2E2_1215	0.14	-0.8
1,420,601	-		Pf6N2E2_1215	0.21	-1.0
1,420,702	-		Pf6N2E2_1215	0.37	-0.5
1,420,702	-		Pf6N2E2_1215	0.37	-0.5
1,420,810	-		Pf6N2E2_1215	0.55	-0.1
1,421,046	+				+0.5
1,421,181	-				-2.5
1,421,383	+				+0.3
1,421,578	-		Pf6N2E2_1216	0.17	-0.5
1,421,938	+		Pf6N2E2_1216	0.30	+0.0
1,421,938	+		Pf6N2E2_1216	0.30	-1.5
1,421,939	-		Pf6N2E2_1216	0.30	-2.1