Experiment: L-Glutamine (C)(N); with TAPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS24920 and PFLU_RS24925 are separated by 80 nucleotides PFLU_RS24925 and PFLU_RS24930 are separated by 93 nucleotides PFLU_RS24930 and PFLU_RS24935 are separated by 244 nucleotides
PFLU_RS24920: PFLU_RS24920 - hypothetical protein, at 5,578,837 to 5,579,781
_RS24920
PFLU_RS24925: PFLU_RS24925 - AlpA family phage regulatory protein, at 5,579,862 to 5,580,539
_RS24925
PFLU_RS24930: PFLU_RS24930 - hypothetical protein, at 5,580,633 to 5,580,812
_RS24930
PFLU_RS24935: PFLU_RS24935 - two pore domain potassium channel family protein, at 5,581,057 to 5,581,848
_RS24935
Position (kb) 5580
5581 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5579.675 kb on + strand, within PFLU_RS24920 at 5579.675 kb on + strand, within PFLU_RS24920 at 5579.697 kb on + strand at 5579.697 kb on + strand at 5579.697 kb on + strand at 5579.698 kb on - strand at 5579.698 kb on - strand at 5579.767 kb on - strand at 5579.779 kb on + strand at 5579.814 kb on + strand at 5579.818 kb on + strand at 5579.818 kb on + strand at 5579.819 kb on - strand at 5579.819 kb on - strand at 5579.819 kb on - strand at 5579.823 kb on + strand at 5579.824 kb on - strand at 5579.824 kb on - strand at 5579.842 kb on + strand at 5579.843 kb on - strand at 5579.843 kb on - strand at 5579.843 kb on - strand at 5579.843 kb on - strand at 5579.853 kb on + strand at 5579.854 kb on - strand at 5579.854 kb on - strand at 5579.861 kb on + strand at 5579.867 kb on + strand at 5579.868 kb on - strand at 5579.872 kb on + strand at 5579.872 kb on + strand at 5579.873 kb on - strand at 5579.873 kb on - strand at 5579.875 kb on + strand at 5579.875 kb on + strand at 5579.875 kb on + strand at 5579.876 kb on - strand at 5579.876 kb on - strand at 5579.941 kb on + strand, within PFLU_RS24925 at 5579.942 kb on - strand, within PFLU_RS24925 at 5579.960 kb on + strand, within PFLU_RS24925 at 5579.960 kb on + strand, within PFLU_RS24925 at 5579.961 kb on - strand, within PFLU_RS24925 at 5579.961 kb on - strand, within PFLU_RS24925 at 5579.961 kb on - strand, within PFLU_RS24925 at 5579.964 kb on + strand, within PFLU_RS24925 at 5579.964 kb on + strand, within PFLU_RS24925 at 5579.964 kb on + strand, within PFLU_RS24925 at 5579.964 kb on + strand, within PFLU_RS24925 at 5579.964 kb on + strand, within PFLU_RS24925 at 5579.964 kb on + strand, within PFLU_RS24925 at 5579.964 kb on + strand, within PFLU_RS24925 at 5579.965 kb on - strand, within PFLU_RS24925 at 5579.965 kb on - strand, within PFLU_RS24925 at 5579.965 kb on - strand, within PFLU_RS24925 at 5579.965 kb on - strand, within PFLU_RS24925 at 5579.965 kb on - strand, within PFLU_RS24925 at 5579.965 kb on - strand, within PFLU_RS24925 at 5579.965 kb on - strand, within PFLU_RS24925 at 5579.965 kb on - strand, within PFLU_RS24925 at 5579.965 kb on - strand, within PFLU_RS24925 at 5579.965 kb on - strand, within PFLU_RS24925 at 5579.965 kb on - strand, within PFLU_RS24925 at 5579.965 kb on - strand, within PFLU_RS24925 at 5579.965 kb on - strand, within PFLU_RS24925 at 5579.965 kb on - strand, within PFLU_RS24925 at 5579.999 kb on + strand, within PFLU_RS24925 at 5580.106 kb on - strand, within PFLU_RS24925 at 5580.250 kb on + strand, within PFLU_RS24925 at 5580.251 kb on - strand, within PFLU_RS24925 at 5580.410 kb on + strand, within PFLU_RS24925 at 5580.411 kb on - strand, within PFLU_RS24925 at 5580.538 kb on - strand at 5580.587 kb on + strand at 5580.587 kb on + strand at 5580.587 kb on + strand at 5580.587 kb on + strand at 5580.588 kb on - strand at 5580.641 kb on + strand at 5580.641 kb on + strand at 5580.642 kb on - strand at 5580.676 kb on + strand, within PFLU_RS24930 at 5580.676 kb on + strand, within PFLU_RS24930 at 5580.677 kb on - strand, within PFLU_RS24930 at 5580.758 kb on + strand, within PFLU_RS24930 at 5580.759 kb on - strand, within PFLU_RS24930 at 5580.759 kb on - strand, within PFLU_RS24930 at 5580.759 kb on - strand, within PFLU_RS24930 at 5580.829 kb on + strand at 5580.829 kb on + strand at 5580.829 kb on + strand at 5580.849 kb on - strand at 5580.875 kb on + strand at 5580.891 kb on + strand at 5580.891 kb on + strand at 5580.892 kb on - strand at 5580.914 kb on - strand at 5580.914 kb on - strand at 5580.951 kb on - strand at 5580.958 kb on - strand at 5580.964 kb on + strand at 5580.964 kb on + strand at 5580.965 kb on - strand at 5580.996 kb on - strand at 5581.002 kb on - strand at 5581.027 kb on - strand at 5581.028 kb on + strand at 5581.194 kb on - strand, within PFLU_RS24935 at 5581.194 kb on - strand, within PFLU_RS24935 at 5581.195 kb on + strand, within PFLU_RS24935 at 5581.195 kb on + strand, within PFLU_RS24935 at 5581.196 kb on - strand, within PFLU_RS24935 at 5581.196 kb on - strand, within PFLU_RS24935 at 5581.205 kb on + strand, within PFLU_RS24935 at 5581.243 kb on - strand, within PFLU_RS24935 at 5581.309 kb on + strand, within PFLU_RS24935 at 5581.309 kb on + strand, within PFLU_RS24935 at 5581.310 kb on - strand, within PFLU_RS24935 at 5581.310 kb on - strand, within PFLU_RS24935 at 5581.340 kb on + strand, within PFLU_RS24935 at 5581.340 kb on + strand, within PFLU_RS24935 at 5581.340 kb on + strand, within PFLU_RS24935 at 5581.340 kb on + strand, within PFLU_RS24935 at 5581.341 kb on - strand, within PFLU_RS24935 at 5581.341 kb on - strand, within PFLU_RS24935 at 5581.341 kb on - strand, within PFLU_RS24935 at 5581.346 kb on + strand, within PFLU_RS24935 at 5581.400 kb on - strand, within PFLU_RS24935 at 5581.415 kb on - strand, within PFLU_RS24935 at 5581.476 kb on - strand, within PFLU_RS24935 at 5581.494 kb on + strand, within PFLU_RS24935 at 5581.537 kb on - strand, within PFLU_RS24935 at 5581.537 kb on - strand, within PFLU_RS24935 at 5581.547 kb on + strand, within PFLU_RS24935 at 5581.553 kb on + strand, within PFLU_RS24935 at 5581.671 kb on - strand, within PFLU_RS24935 at 5581.771 kb on + strand at 5581.774 kb on - strand at 5581.787 kb on - strand at 5581.789 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C)(N); with TAPS remove 5,579,675 + PFLU_RS24920 0.89 +0.2 5,579,675 + PFLU_RS24920 0.89 -0.3 5,579,697 + +0.1 5,579,697 + +0.6 5,579,697 + -1.4 5,579,698 - -1.3 5,579,698 - +0.9 5,579,767 - +1.1 5,579,779 + -0.9 5,579,814 + -0.4 5,579,818 + +0.5 5,579,818 + -0.9 5,579,819 - -0.5 5,579,819 - +0.5 5,579,819 - +0.2 5,579,823 + +0.4 5,579,824 - -0.5 5,579,824 - -0.2 5,579,842 + +0.7 5,579,843 - -1.1 5,579,843 - +0.1 5,579,843 - +1.1 5,579,843 - -2.8 5,579,853 + -2.2 5,579,854 - -0.9 5,579,854 - +0.3 5,579,861 + -0.5 5,579,867 + +0.8 5,579,868 - -1.6 5,579,872 + +0.7 5,579,872 + +0.7 5,579,873 - -0.1 5,579,873 - +0.1 5,579,875 + +0.5 5,579,875 + -1.3 5,579,875 + -0.5 5,579,876 - +2.6 5,579,876 - -0.1 5,579,941 + PFLU_RS24925 0.12 -1.5 5,579,942 - PFLU_RS24925 0.12 +0.1 5,579,960 + PFLU_RS24925 0.14 +1.9 5,579,960 + PFLU_RS24925 0.14 +0.2 5,579,961 - PFLU_RS24925 0.15 -1.0 5,579,961 - PFLU_RS24925 0.15 +1.2 5,579,961 - PFLU_RS24925 0.15 +0.8 5,579,964 + PFLU_RS24925 0.15 +0.3 5,579,964 + PFLU_RS24925 0.15 +0.9 5,579,964 + PFLU_RS24925 0.15 +0.9 5,579,964 + PFLU_RS24925 0.15 -0.3 5,579,964 + PFLU_RS24925 0.15 -1.1 5,579,964 + PFLU_RS24925 0.15 +0.4 5,579,964 + PFLU_RS24925 0.15 -1.3 5,579,965 - PFLU_RS24925 0.15 +0.6 5,579,965 - PFLU_RS24925 0.15 +0.3 5,579,965 - PFLU_RS24925 0.15 +1.2 5,579,965 - PFLU_RS24925 0.15 -0.2 5,579,965 - PFLU_RS24925 0.15 -0.3 5,579,965 - PFLU_RS24925 0.15 -1.4 5,579,965 - PFLU_RS24925 0.15 +1.1 5,579,965 - PFLU_RS24925 0.15 -0.2 5,579,965 - PFLU_RS24925 0.15 -0.3 5,579,965 - PFLU_RS24925 0.15 +0.5 5,579,965 - PFLU_RS24925 0.15 +0.3 5,579,965 - PFLU_RS24925 0.15 -0.4 5,579,965 - PFLU_RS24925 0.15 -0.5 5,579,965 - PFLU_RS24925 0.15 +0.1 5,579,999 + PFLU_RS24925 0.20 +0.4 5,580,106 - PFLU_RS24925 0.36 -1.4 5,580,250 + PFLU_RS24925 0.57 +0.0 5,580,251 - PFLU_RS24925 0.57 +0.9 5,580,410 + PFLU_RS24925 0.81 +0.5 5,580,411 - PFLU_RS24925 0.81 -0.3 5,580,538 - -0.1 5,580,587 + +1.3 5,580,587 + -0.4 5,580,587 + +1.5 5,580,587 + +0.2 5,580,588 - +0.2 5,580,641 + +0.3 5,580,641 + +0.9 5,580,642 - +0.5 5,580,676 + PFLU_RS24930 0.24 +1.2 5,580,676 + PFLU_RS24930 0.24 +2.7 5,580,677 - PFLU_RS24930 0.24 -0.8 5,580,758 + PFLU_RS24930 0.69 -0.0 5,580,759 - PFLU_RS24930 0.70 +1.2 5,580,759 - PFLU_RS24930 0.70 +2.7 5,580,759 - PFLU_RS24930 0.70 -2.2 5,580,829 + -2.0 5,580,829 + -1.8 5,580,829 + +0.6 5,580,849 - +0.0 5,580,875 + -0.7 5,580,891 + -0.7 5,580,891 + -0.3 5,580,892 - -1.1 5,580,914 - -0.0 5,580,914 - +0.6 5,580,951 - +0.8 5,580,958 - +0.8 5,580,964 + -0.0 5,580,964 + -0.5 5,580,965 - -2.0 5,580,996 - -0.8 5,581,002 - -0.3 5,581,027 - -1.3 5,581,028 + -0.5 5,581,194 - PFLU_RS24935 0.17 +0.3 5,581,194 - PFLU_RS24935 0.17 +1.3 5,581,195 + PFLU_RS24935 0.17 +0.5 5,581,195 + PFLU_RS24935 0.17 +0.6 5,581,196 - PFLU_RS24935 0.18 +0.6 5,581,196 - PFLU_RS24935 0.18 -1.0 5,581,205 + PFLU_RS24935 0.19 -0.9 5,581,243 - PFLU_RS24935 0.23 +1.3 5,581,309 + PFLU_RS24935 0.32 -0.9 5,581,309 + PFLU_RS24935 0.32 +0.2 5,581,310 - PFLU_RS24935 0.32 -0.1 5,581,310 - PFLU_RS24935 0.32 +0.9 5,581,340 + PFLU_RS24935 0.36 -0.8 5,581,340 + PFLU_RS24935 0.36 -0.3 5,581,340 + PFLU_RS24935 0.36 -0.7 5,581,340 + PFLU_RS24935 0.36 -0.1 5,581,341 - PFLU_RS24935 0.36 +0.4 5,581,341 - PFLU_RS24935 0.36 +0.9 5,581,341 - PFLU_RS24935 0.36 -0.8 5,581,346 + PFLU_RS24935 0.36 +0.7 5,581,400 - PFLU_RS24935 0.43 -1.8 5,581,415 - PFLU_RS24935 0.45 +1.0 5,581,476 - PFLU_RS24935 0.53 -0.6 5,581,494 + PFLU_RS24935 0.55 +0.2 5,581,537 - PFLU_RS24935 0.61 +1.2 5,581,537 - PFLU_RS24935 0.61 -0.5 5,581,547 + PFLU_RS24935 0.62 +0.9 5,581,553 + PFLU_RS24935 0.63 -0.0 5,581,671 - PFLU_RS24935 0.78 +1.2 5,581,771 + +0.6 5,581,774 - -1.8 5,581,787 - -0.8 5,581,789 - -0.9
Or see this region's nucleotide sequence