Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21215

Experiment: L-Glutamine (C)(N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamine (C)(N); with TAPS
4,774,072	+		PFLU_RS21210	0.24	+0.0
4,774,121	+		PFLU_RS21210	0.28	-2.0
4,774,242	+		PFLU_RS21210	0.38	-0.3
4,774,242	+		PFLU_RS21210	0.38	+0.2
4,774,293	+		PFLU_RS21210	0.43	+0.5
4,774,293	+		PFLU_RS21210	0.43	-1.4
4,774,293	+		PFLU_RS21210	0.43	-0.4
4,774,293	+		PFLU_RS21210	0.43	-0.3
4,774,293	+		PFLU_RS21210	0.43	-0.1
4,774,293	+		PFLU_RS21210	0.43	+0.4
4,774,293	+		PFLU_RS21210	0.43	+0.1
4,774,294	-		PFLU_RS21210	0.43	-2.3
4,774,294	-		PFLU_RS21210	0.43	-2.1
4,774,294	-		PFLU_RS21210	0.43	+0.8
4,774,294	-		PFLU_RS21210	0.43	-0.4
4,774,294	-		PFLU_RS21210	0.43	+0.7
4,774,294	-		PFLU_RS21210	0.43	-2.1
4,774,599	+		PFLU_RS21210	0.69	+0.9
4,774,600	-		PFLU_RS21210	0.69	+1.4
4,774,600	-		PFLU_RS21210	0.69	-1.7
4,774,600	-		PFLU_RS21210	0.69	-0.1
4,774,605	+		PFLU_RS21210	0.69	-0.6
4,774,605	+		PFLU_RS21210	0.69	+1.0
4,774,605	+		PFLU_RS21210	0.69	+0.7
4,774,606	-		PFLU_RS21210	0.69	-0.7
4,774,627	+		PFLU_RS21210	0.71	+0.9
4,774,627	+		PFLU_RS21210	0.71	-2.1
4,774,627	+		PFLU_RS21210	0.71	+0.0
4,774,627	+		PFLU_RS21210	0.71	-1.1
4,774,628	-		PFLU_RS21210	0.71	-0.4
4,774,628	-		PFLU_RS21210	0.71	+0.4
4,774,628	-		PFLU_RS21210	0.71	+0.6
4,774,628	-		PFLU_RS21210	0.71	-0.1
4,774,680	+		PFLU_RS21210	0.75	+0.6
4,774,680	+		PFLU_RS21210	0.75	-0.3
4,774,680	+		PFLU_RS21210	0.75	+0.9
4,774,680	+		PFLU_RS21210	0.75	-1.0
4,774,680	+		PFLU_RS21210	0.75	-0.3
4,774,681	-		PFLU_RS21210	0.76	+0.6
4,774,681	-		PFLU_RS21210	0.76	-0.6
4,774,681	-		PFLU_RS21210	0.76	+0.3
4,774,681	-		PFLU_RS21210	0.76	-1.8
4,774,681	-		PFLU_RS21210	0.76	-1.3
4,774,681	-		PFLU_RS21210	0.76	-0.7
4,774,681	-		PFLU_RS21210	0.76	-1.9
4,774,768	-		PFLU_RS21210	0.83	-0.4
4,774,768	-		PFLU_RS21210	0.83	+2.9
4,774,821	+		PFLU_RS21210	0.87	+0.5
4,774,821	+		PFLU_RS21210	0.87	+0.4
4,774,821	+		PFLU_RS21210	0.87	-0.2
4,774,822	-		PFLU_RS21210	0.87	+0.0
4,774,961	+				-0.7
4,774,961	+				-2.2
4,774,961	+				+1.6
4,774,961	+				-1.8
4,774,962	-				+1.3
4,774,962	-				-0.7
4,774,962	-				+1.0
4,774,962	-				-0.2
4,774,962	-				+2.6
4,774,997	+				-0.8
4,774,998	-				+0.1
4,775,029	+				+0.2
4,775,029	+				-1.8
4,775,029	+				+0.0
4,775,029	+				+0.2
4,775,029	+				+1.6
4,775,029	+				-0.3
4,775,029	+				-0.7
4,775,029	+				-0.2
4,775,029	+				+0.3
4,775,029	+				+1.1
4,775,029	+				+0.4
4,775,029	+				+0.7
4,775,029	+				+0.0
4,775,029	+				-1.8
4,775,030	-				-0.8
4,775,030	-				-0.6
4,775,030	-				-0.4
4,775,030	-				+0.1
4,775,030	-				+1.5
4,775,030	-				-0.4
4,775,030	-				+0.8
4,775,030	-				+0.4
4,775,030	-				+1.0
4,775,030	-				+0.1
4,775,030	-				-0.2
4,775,030	-				+1.6
4,775,030	-				+0.7
4,775,030	-				+1.8
4,775,030	-				-0.7
4,775,043	-				+0.6
4,775,151	+		PFLU_RS21215	0.53	+0.0
4,775,152	-		PFLU_RS21215	0.54	+0.6
4,775,321	+		PFLU_RS21220	0.30	+0.6
4,775,321	+		PFLU_RS21220	0.30	+1.3
4,775,321	+		PFLU_RS21220	0.30	+1.3
4,775,322	-		PFLU_RS21220	0.30	+0.4
4,775,338	+		PFLU_RS21220	0.38	+0.1
4,775,338	+		PFLU_RS21220	0.38	-0.6
4,775,338	+		PFLU_RS21220	0.38	+0.8
4,775,338	+		PFLU_RS21220	0.38	+0.2
4,775,338	+		PFLU_RS21220	0.38	-0.4
4,775,338	+		PFLU_RS21220	0.38	-1.3
4,775,338	+		PFLU_RS21220	0.38	-2.0
4,775,338	+		PFLU_RS21220	0.38	-0.2
4,775,338	+		PFLU_RS21220	0.38	-1.4
4,775,338	+		PFLU_RS21220	0.38	-1.2
4,775,338	+		PFLU_RS21220	0.38	-0.2
4,775,338	+		PFLU_RS21220	0.38	-1.0
4,775,338	+		PFLU_RS21220	0.38	-0.6
4,775,338	+		PFLU_RS21220	0.38	-0.1
4,775,338	+		PFLU_RS21220	0.38	+1.1
4,775,338	+		PFLU_RS21220	0.38	+1.4
4,775,339	-		PFLU_RS21220	0.39	-1.8
4,775,339	-		PFLU_RS21220	0.39	+0.8
4,775,339	-		PFLU_RS21220	0.39	-0.1
4,775,339	-		PFLU_RS21220	0.39	-0.2
4,775,339	-		PFLU_RS21220	0.39	+0.7
4,775,339	-		PFLU_RS21220	0.39	-0.5
4,775,339	-		PFLU_RS21220	0.39	-1.2
4,775,339	-		PFLU_RS21220	0.39	+0.0
4,775,339	-		PFLU_RS21220	0.39	-1.1
4,775,339	-		PFLU_RS21220	0.39	+1.2
4,775,339	-		PFLU_RS21220	0.39	-0.4
4,775,339	-		PFLU_RS21220	0.39	+0.7
4,775,339	-		PFLU_RS21220	0.39	-1.1
4,775,339	-		PFLU_RS21220	0.39	-2.1
4,775,339	-		PFLU_RS21220	0.39	+0.0
4,775,339	-		PFLU_RS21220	0.39	-0.5
4,775,339	-		PFLU_RS21220	0.39	+0.0
4,775,339	-		PFLU_RS21220	0.39	-0.1
4,775,339	-		PFLU_RS21220	0.39	-1.1
4,775,441	-		PFLU_RS21220	0.89	+0.3
4,775,452	+				+0.2
4,775,453	-				-0.3
4,775,476	+				-0.1
4,775,476	+				+1.0
4,775,476	+				+0.9
4,775,476	+				-0.4
4,775,477	-				-0.7
4,775,477	-				-2.0
4,775,477	-				+0.3
4,775,477	-				+0.3
4,775,477	-				-1.2
4,775,477	-				+0.1
4,775,479	+				-1.0
4,775,479	+				+0.6
4,775,479	+				-2.8
4,775,480	-				-0.4
4,775,480	-				-1.4
4,775,480	-				+1.2
4,775,480	-				+0.7
4,775,480	-				+0.1
4,775,480	-				-0.2
4,775,554	+				-2.7
4,775,558	+				-0.2
4,775,558	+				+0.2
4,775,558	+				-1.2
4,775,558	+				+0.9
4,775,558	+				-0.7
4,775,558	+				-1.7
4,775,558	+				-1.5
4,775,558	+				+1.2
4,775,558	+				-1.5
4,775,558	+				-0.4
4,775,559	-				-0.6
4,775,559	-				-0.4
4,775,559	-				-0.9
4,775,559	-				+0.3
4,775,559	-				+1.1
4,775,559	-				-1.3
4,775,566	+				-0.5
4,775,567	-				-1.0
4,775,567	-				-2.5
4,775,567	-				-0.4
4,775,654	+				-0.1
4,775,655	-				-0.5
4,775,655	-				-0.4
4,775,747	+		PFLU_RS21225	0.19	-0.3
4,775,747	+		PFLU_RS21225	0.19	+1.2
4,775,747	+		PFLU_RS21225	0.19	+0.6
4,775,747	+		PFLU_RS21225	0.19	+0.8
4,775,747	+		PFLU_RS21225	0.19	-0.4
4,775,747	+		PFLU_RS21225	0.19	-0.3
4,775,747	+		PFLU_RS21225	0.19	-0.1
4,775,747	+		PFLU_RS21225	0.19	-1.0
4,775,747	+		PFLU_RS21225	0.19	+0.2
4,775,747	+		PFLU_RS21225	0.19	-0.3
4,775,747	+		PFLU_RS21225	0.19	-1.2
4,775,748	-		PFLU_RS21225	0.19	-1.3
4,775,748	-		PFLU_RS21225	0.19	-0.4
4,775,748	-		PFLU_RS21225	0.19	-2.5
4,775,748	-		PFLU_RS21225	0.19	-0.3
4,775,748	-		PFLU_RS21225	0.19	-0.7
4,775,748	-		PFLU_RS21225	0.19	-0.0
4,775,748	-		PFLU_RS21225	0.19	-1.0
4,775,748	-		PFLU_RS21225	0.19	-0.3
4,775,748	-		PFLU_RS21225	0.19	-0.8
4,775,748	-		PFLU_RS21225	0.19	+0.9
4,775,753	+		PFLU_RS21225	0.20	-0.4
4,775,753	+		PFLU_RS21225	0.20	+0.6
4,775,753	+		PFLU_RS21225	0.20	-1.4
4,775,753	+		PFLU_RS21225	0.20	+0.9
4,775,753	+		PFLU_RS21225	0.20	-1.4
4,775,753	+		PFLU_RS21225	0.20	+0.4
4,775,753	+		PFLU_RS21225	0.20	-1.2
4,775,753	+		PFLU_RS21225	0.20	+2.2
4,775,753	+		PFLU_RS21225	0.20	+0.0
4,775,753	+		PFLU_RS21225	0.20	-0.7
4,775,753	+		PFLU_RS21225	0.20	-0.1
4,775,754	-		PFLU_RS21225	0.20	-2.0
4,775,754	-		PFLU_RS21225	0.20	-0.4
4,775,754	-		PFLU_RS21225	0.20	-0.1
4,775,754	-		PFLU_RS21225	0.20	+0.1
4,775,754	-		PFLU_RS21225	0.20	-0.2
4,775,754	-		PFLU_RS21225	0.20	+1.4
4,775,960	+		PFLU_RS21225	0.45	+1.2
4,775,960	+		PFLU_RS21225	0.45	+0.1
4,775,960	+		PFLU_RS21225	0.45	-1.7
4,775,960	+		PFLU_RS21225	0.45	-0.2
4,775,960	+		PFLU_RS21225	0.45	-0.3
4,775,960	+		PFLU_RS21225	0.45	+0.0
4,775,960	+		PFLU_RS21225	0.45	+0.4
4,775,961	-		PFLU_RS21225	0.45	+0.0
4,775,961	-		PFLU_RS21225	0.45	+2.1
4,775,961	-		PFLU_RS21225	0.45	+0.8
4,775,961	-		PFLU_RS21225	0.45	-0.4
4,775,961	-		PFLU_RS21225	0.45	-1.2
4,775,961	-		PFLU_RS21225	0.45	+0.6
4,776,015	+		PFLU_RS21225	0.52	-0.2
4,776,015	+		PFLU_RS21225	0.52	-0.4
4,776,184	+		PFLU_RS21225	0.72	+0.7
4,776,222	-		PFLU_RS21225	0.77	-0.1
4,776,222	-		PFLU_RS21225	0.77	-1.7