Experiment: L-Glutamine (C)(N); with TAPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS18795 and PFLU_RS18800 are separated by 4 nucleotides PFLU_RS18800 and PFLU_RS18805 overlap by 4 nucleotides PFLU_RS18805 and PFLU_RS18810 overlap by 4 nucleotides
PFLU_RS18795: PFLU_RS18795 - branched-chain amino acid ABC transporter permease, at 4,249,995 to 4,251,044
_RS18795
PFLU_RS18800: PFLU_RS18800 - branched-chain amino acid ABC transporter permease, at 4,251,049 to 4,251,930
_RS18800
PFLU_RS18805: PFLU_RS18805 - ABC transporter ATP-binding protein, at 4,251,927 to 4,252,700
_RS18805
PFLU_RS18810: PFLU_RS18810 - AMP-binding protein, at 4,252,697 to 4,253,599
_RS18810
Position (kb) 4251
4252
4253 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4250.951 kb on + strand at 4251.096 kb on + strand at 4251.098 kb on + strand at 4251.098 kb on + strand at 4251.098 kb on + strand at 4251.098 kb on + strand at 4251.098 kb on + strand at 4251.098 kb on + strand at 4251.098 kb on + strand at 4251.098 kb on + strand at 4251.098 kb on + strand at 4251.098 kb on + strand at 4251.098 kb on + strand at 4251.098 kb on + strand at 4251.098 kb on + strand at 4251.098 kb on + strand at 4251.098 kb on + strand at 4251.098 kb on + strand at 4251.098 kb on + strand at 4251.099 kb on - strand at 4251.099 kb on - strand at 4251.099 kb on - strand at 4251.099 kb on - strand at 4251.099 kb on - strand at 4251.099 kb on - strand at 4251.099 kb on - strand at 4251.099 kb on - strand at 4251.099 kb on - strand at 4251.099 kb on - strand at 4251.099 kb on - strand at 4251.099 kb on - strand at 4251.099 kb on - strand at 4251.099 kb on - strand at 4251.099 kb on - strand at 4251.099 kb on - strand at 4251.099 kb on - strand at 4251.099 kb on - strand at 4251.118 kb on + strand at 4251.118 kb on + strand at 4251.118 kb on + strand at 4251.118 kb on + strand at 4251.118 kb on + strand at 4251.118 kb on + strand at 4251.119 kb on - strand at 4251.119 kb on - strand at 4251.119 kb on - strand at 4251.119 kb on - strand at 4251.119 kb on - strand at 4251.119 kb on - strand at 4251.119 kb on - strand at 4251.119 kb on - strand at 4251.122 kb on + strand at 4251.122 kb on + strand at 4251.122 kb on + strand at 4251.123 kb on - strand at 4251.123 kb on - strand at 4251.123 kb on - strand at 4251.167 kb on + strand, within PFLU_RS18800 at 4251.167 kb on + strand, within PFLU_RS18800 at 4251.167 kb on + strand, within PFLU_RS18800 at 4251.167 kb on + strand, within PFLU_RS18800 at 4251.167 kb on + strand, within PFLU_RS18800 at 4251.167 kb on + strand, within PFLU_RS18800 at 4251.167 kb on + strand, within PFLU_RS18800 at 4251.167 kb on + strand, within PFLU_RS18800 at 4251.168 kb on - strand, within PFLU_RS18800 at 4251.168 kb on - strand, within PFLU_RS18800 at 4251.168 kb on - strand, within PFLU_RS18800 at 4251.168 kb on - strand, within PFLU_RS18800 at 4251.168 kb on - strand, within PFLU_RS18800 at 4251.168 kb on - strand, within PFLU_RS18800 at 4251.234 kb on + strand, within PFLU_RS18800 at 4251.235 kb on - strand, within PFLU_RS18800 at 4251.235 kb on - strand, within PFLU_RS18800 at 4251.246 kb on + strand, within PFLU_RS18800 at 4251.550 kb on + strand, within PFLU_RS18800 at 4251.550 kb on + strand, within PFLU_RS18800 at 4251.550 kb on + strand, within PFLU_RS18800 at 4251.550 kb on + strand, within PFLU_RS18800 at 4251.551 kb on - strand, within PFLU_RS18800 at 4251.551 kb on - strand, within PFLU_RS18800 at 4251.721 kb on + strand, within PFLU_RS18800 at 4251.722 kb on - strand, within PFLU_RS18800 at 4251.845 kb on + strand at 4251.845 kb on + strand at 4251.845 kb on + strand at 4251.845 kb on + strand at 4251.845 kb on + strand at 4251.845 kb on + strand at 4251.846 kb on - strand at 4251.846 kb on - strand at 4251.846 kb on - strand at 4251.846 kb on - strand at 4251.846 kb on - strand at 4251.846 kb on - strand at 4251.846 kb on - strand at 4251.846 kb on - strand at 4251.878 kb on + strand at 4251.878 kb on + strand at 4251.878 kb on + strand at 4251.878 kb on + strand at 4251.879 kb on - strand at 4251.879 kb on - strand at 4251.879 kb on - strand at 4251.879 kb on - strand at 4251.879 kb on - strand at 4251.936 kb on + strand at 4251.936 kb on + strand at 4251.949 kb on + strand at 4251.949 kb on + strand at 4251.950 kb on - strand at 4251.950 kb on - strand at 4252.104 kb on + strand, within PFLU_RS18805 at 4252.104 kb on + strand, within PFLU_RS18805 at 4252.105 kb on - strand, within PFLU_RS18805 at 4252.105 kb on - strand, within PFLU_RS18805 at 4252.105 kb on - strand, within PFLU_RS18805 at 4252.537 kb on + strand, within PFLU_RS18805 at 4252.571 kb on + strand, within PFLU_RS18805 at 4252.751 kb on - strand at 4252.767 kb on + strand at 4252.767 kb on + strand at 4252.767 kb on + strand at 4252.768 kb on - strand at 4253.193 kb on - strand, within PFLU_RS18810 at 4253.214 kb on + strand, within PFLU_RS18810 at 4253.214 kb on + strand, within PFLU_RS18810 at 4253.214 kb on + strand, within PFLU_RS18810 at 4253.214 kb on + strand, within PFLU_RS18810 at 4253.214 kb on + strand, within PFLU_RS18810 at 4253.214 kb on + strand, within PFLU_RS18810 at 4253.214 kb on + strand, within PFLU_RS18810 at 4253.215 kb on - strand, within PFLU_RS18810 at 4253.215 kb on - strand, within PFLU_RS18810 at 4253.215 kb on - strand, within PFLU_RS18810 at 4253.215 kb on - strand, within PFLU_RS18810 at 4253.215 kb on - strand, within PFLU_RS18810 at 4253.215 kb on - strand, within PFLU_RS18810 at 4253.215 kb on - strand, within PFLU_RS18810 at 4253.448 kb on + strand, within PFLU_RS18810 at 4253.448 kb on + strand, within PFLU_RS18810 at 4253.449 kb on - strand, within PFLU_RS18810 at 4253.449 kb on - strand, within PFLU_RS18810 at 4253.449 kb on - strand, within PFLU_RS18810 at 4253.449 kb on - strand, within PFLU_RS18810 at 4253.599 kb on + strand at 4253.599 kb on + strand at 4253.605 kb on + strand at 4253.614 kb on + strand at 4253.653 kb on - strand at 4253.673 kb on - strand at 4253.673 kb on - strand at 4253.673 kb on - strand at 4253.673 kb on - strand at 4253.673 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C)(N); with TAPS remove 4,250,951 + +0.6 4,251,096 + -0.6 4,251,098 + -0.2 4,251,098 + -0.4 4,251,098 + +0.4 4,251,098 + +0.6 4,251,098 + +2.4 4,251,098 + +0.3 4,251,098 + -0.2 4,251,098 + -0.9 4,251,098 + +1.1 4,251,098 + +0.5 4,251,098 + -0.6 4,251,098 + -1.2 4,251,098 + +0.3 4,251,098 + -0.6 4,251,098 + +1.8 4,251,098 + -1.6 4,251,098 + +0.4 4,251,099 - +0.7 4,251,099 - -0.5 4,251,099 - +0.4 4,251,099 - +0.8 4,251,099 - -0.9 4,251,099 - -0.3 4,251,099 - +0.4 4,251,099 - -0.7 4,251,099 - -0.9 4,251,099 - -0.1 4,251,099 - -2.0 4,251,099 - +1.8 4,251,099 - +0.3 4,251,099 - -0.2 4,251,099 - -1.2 4,251,099 - +0.5 4,251,099 - -2.7 4,251,099 - -2.0 4,251,118 + +1.0 4,251,118 + +0.3 4,251,118 + +0.3 4,251,118 + -0.2 4,251,118 + +0.4 4,251,118 + +0.3 4,251,119 - -0.6 4,251,119 - -0.3 4,251,119 - +0.2 4,251,119 - +1.0 4,251,119 - +0.0 4,251,119 - -0.2 4,251,119 - -1.8 4,251,119 - +0.5 4,251,122 + +0.2 4,251,122 + -0.2 4,251,122 + +0.0 4,251,123 - -2.2 4,251,123 - -1.5 4,251,123 - +0.4 4,251,167 + PFLU_RS18800 0.13 -1.1 4,251,167 + PFLU_RS18800 0.13 -0.6 4,251,167 + PFLU_RS18800 0.13 +0.2 4,251,167 + PFLU_RS18800 0.13 -0.9 4,251,167 + PFLU_RS18800 0.13 +0.3 4,251,167 + PFLU_RS18800 0.13 +0.7 4,251,167 + PFLU_RS18800 0.13 -0.2 4,251,167 + PFLU_RS18800 0.13 +2.2 4,251,168 - PFLU_RS18800 0.13 -1.6 4,251,168 - PFLU_RS18800 0.13 -0.7 4,251,168 - PFLU_RS18800 0.13 +0.3 4,251,168 - PFLU_RS18800 0.13 +0.9 4,251,168 - PFLU_RS18800 0.13 +0.3 4,251,168 - PFLU_RS18800 0.13 +0.4 4,251,234 + PFLU_RS18800 0.21 +1.2 4,251,235 - PFLU_RS18800 0.21 -1.4 4,251,235 - PFLU_RS18800 0.21 -0.2 4,251,246 + PFLU_RS18800 0.22 +1.4 4,251,550 + PFLU_RS18800 0.57 +0.0 4,251,550 + PFLU_RS18800 0.57 +0.4 4,251,550 + PFLU_RS18800 0.57 -0.2 4,251,550 + PFLU_RS18800 0.57 -0.9 4,251,551 - PFLU_RS18800 0.57 -1.4 4,251,551 - PFLU_RS18800 0.57 -0.9 4,251,721 + PFLU_RS18800 0.76 +1.1 4,251,722 - PFLU_RS18800 0.76 +0.2 4,251,845 + +0.3 4,251,845 + +1.4 4,251,845 + +0.3 4,251,845 + +0.1 4,251,845 + -0.2 4,251,845 + -0.2 4,251,846 - +1.0 4,251,846 - -0.4 4,251,846 - -0.1 4,251,846 - -0.6 4,251,846 - +0.8 4,251,846 - -0.5 4,251,846 - -0.6 4,251,846 - -0.8 4,251,878 + +0.4 4,251,878 + -0.2 4,251,878 + -0.8 4,251,878 + +0.6 4,251,879 - +1.0 4,251,879 - -0.6 4,251,879 - -0.2 4,251,879 - +1.1 4,251,879 - +0.8 4,251,936 + -0.7 4,251,936 + +0.1 4,251,949 + -0.6 4,251,949 + -1.0 4,251,950 - -0.9 4,251,950 - -1.0 4,252,104 + PFLU_RS18805 0.23 -0.1 4,252,104 + PFLU_RS18805 0.23 -1.9 4,252,105 - PFLU_RS18805 0.23 -0.8 4,252,105 - PFLU_RS18805 0.23 -0.4 4,252,105 - PFLU_RS18805 0.23 -0.9 4,252,537 + PFLU_RS18805 0.79 -0.4 4,252,571 + PFLU_RS18805 0.83 +0.2 4,252,751 - -0.1 4,252,767 + +1.4 4,252,767 + -0.0 4,252,767 + -0.6 4,252,768 - -0.6 4,253,193 - PFLU_RS18810 0.55 +0.1 4,253,214 + PFLU_RS18810 0.57 -0.8 4,253,214 + PFLU_RS18810 0.57 -0.1 4,253,214 + PFLU_RS18810 0.57 +1.0 4,253,214 + PFLU_RS18810 0.57 -1.5 4,253,214 + PFLU_RS18810 0.57 +0.4 4,253,214 + PFLU_RS18810 0.57 -0.3 4,253,214 + PFLU_RS18810 0.57 +0.7 4,253,215 - PFLU_RS18810 0.57 -0.1 4,253,215 - PFLU_RS18810 0.57 -1.9 4,253,215 - PFLU_RS18810 0.57 +1.7 4,253,215 - PFLU_RS18810 0.57 -0.7 4,253,215 - PFLU_RS18810 0.57 -1.3 4,253,215 - PFLU_RS18810 0.57 -0.7 4,253,215 - PFLU_RS18810 0.57 +0.1 4,253,448 + PFLU_RS18810 0.83 +0.2 4,253,448 + PFLU_RS18810 0.83 -0.3 4,253,449 - PFLU_RS18810 0.83 +0.7 4,253,449 - PFLU_RS18810 0.83 +0.1 4,253,449 - PFLU_RS18810 0.83 -0.6 4,253,449 - PFLU_RS18810 0.83 -0.3 4,253,599 + -0.1 4,253,599 + -0.3 4,253,605 + +0.3 4,253,614 + -1.7 4,253,653 - -1.1 4,253,673 - -1.7 4,253,673 - +1.3 4,253,673 - +0.4 4,253,673 - -0.6 4,253,673 - -0.6
Or see this region's nucleotide sequence