Experiment: L-Glutamine (C)(N); with TAPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS30905 and PFLU_RS18345 are separated by 261 nucleotides PFLU_RS18345 and PFLU_RS18350 are separated by 40 nucleotides PFLU_RS18350 and PFLU_RS18355 are separated by 293 nucleotides PFLU_RS18355 and PFLU_RS18360 are separated by 152 nucleotides
PFLU_RS30905: PFLU_RS30905 - hypothetical protein, at 4,161,812 to 4,162,261
_RS30905
PFLU_RS18345: PFLU_RS18345 - hypothetical protein, at 4,162,523 to 4,163,146
_RS18345
PFLU_RS18350: PFLU_RS18350 - GIY-YIG nuclease family protein, at 4,163,187 to 4,163,321
_RS18350
PFLU_RS18355: PFLU_RS18355 - tRNA-Ser, at 4,163,615 to 4,163,705
_RS18355
PFLU_RS18360: PFLU_RS18360 - Bax inhibitor-1/YccA family protein, at 4,163,858 to 4,164,529
_RS18360
Position (kb) 4163
4164 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 4162.231 kb on + strand at 4162.235 kb on + strand at 4162.235 kb on + strand at 4162.235 kb on + strand at 4162.235 kb on + strand at 4162.235 kb on + strand at 4162.284 kb on + strand at 4162.324 kb on + strand at 4162.363 kb on + strand at 4162.381 kb on + strand at 4162.419 kb on + strand at 4162.419 kb on + strand at 4162.419 kb on + strand at 4162.494 kb on + strand at 4162.495 kb on - strand at 4162.495 kb on - strand at 4162.510 kb on + strand at 4162.522 kb on + strand at 4162.523 kb on - strand at 4162.570 kb on + strand at 4162.570 kb on + strand at 4162.624 kb on - strand, within PFLU_RS18345 at 4162.659 kb on + strand, within PFLU_RS18345 at 4162.680 kb on - strand, within PFLU_RS18345 at 4162.697 kb on - strand, within PFLU_RS18345 at 4162.767 kb on - strand, within PFLU_RS18345 at 4162.767 kb on - strand, within PFLU_RS18345 at 4162.784 kb on + strand, within PFLU_RS18345 at 4162.785 kb on - strand, within PFLU_RS18345 at 4162.811 kb on + strand, within PFLU_RS18345 at 4162.822 kb on + strand, within PFLU_RS18345 at 4162.823 kb on - strand, within PFLU_RS18345 at 4162.823 kb on - strand, within PFLU_RS18345 at 4162.823 kb on - strand, within PFLU_RS18345 at 4162.825 kb on + strand, within PFLU_RS18345 at 4162.864 kb on + strand, within PFLU_RS18345 at 4162.864 kb on + strand, within PFLU_RS18345 at 4162.866 kb on + strand, within PFLU_RS18345 at 4162.913 kb on + strand, within PFLU_RS18345 at 4162.913 kb on + strand, within PFLU_RS18345 at 4162.950 kb on - strand, within PFLU_RS18345 at 4162.972 kb on + strand, within PFLU_RS18345 at 4162.972 kb on + strand, within PFLU_RS18345 at 4162.972 kb on + strand, within PFLU_RS18345 at 4163.053 kb on + strand, within PFLU_RS18345 at 4163.054 kb on - strand, within PFLU_RS18345 at 4163.103 kb on + strand at 4163.103 kb on + strand at 4163.104 kb on - strand at 4163.116 kb on - strand at 4163.211 kb on - strand, within PFLU_RS18350 at 4163.287 kb on + strand, within PFLU_RS18350 at 4163.287 kb on + strand, within PFLU_RS18350 at 4163.287 kb on + strand, within PFLU_RS18350 at 4163.307 kb on + strand, within PFLU_RS18350 at 4163.499 kb on + strand at 4163.500 kb on - strand at 4163.500 kb on - strand at 4163.526 kb on + strand at 4163.526 kb on + strand at 4163.526 kb on + strand at 4163.526 kb on + strand at 4163.526 kb on + strand at 4163.526 kb on + strand at 4163.527 kb on - strand at 4163.527 kb on - strand at 4163.527 kb on - strand at 4163.527 kb on - strand at 4163.527 kb on - strand at 4163.527 kb on - strand at 4163.527 kb on - strand at 4163.543 kb on + strand at 4163.543 kb on + strand at 4163.543 kb on + strand at 4163.544 kb on - strand at 4163.544 kb on - strand at 4163.544 kb on - strand at 4163.544 kb on - strand at 4163.544 kb on - strand at 4163.544 kb on - strand at 4163.544 kb on - strand at 4163.547 kb on + strand at 4163.547 kb on + strand at 4163.548 kb on - strand at 4163.608 kb on - strand at 4163.608 kb on - strand at 4163.725 kb on - strand at 4163.725 kb on - strand at 4163.725 kb on - strand at 4163.725 kb on - strand at 4163.725 kb on - strand at 4163.725 kb on - strand at 4163.725 kb on - strand at 4163.728 kb on - strand at 4163.728 kb on - strand at 4163.799 kb on + strand at 4163.799 kb on + strand at 4163.813 kb on + strand at 4163.874 kb on - strand at 4163.874 kb on - strand at 4163.936 kb on + strand, within PFLU_RS18360 at 4163.936 kb on + strand, within PFLU_RS18360 at 4163.936 kb on + strand, within PFLU_RS18360 at 4163.936 kb on + strand, within PFLU_RS18360 at 4163.936 kb on + strand, within PFLU_RS18360 at 4163.936 kb on + strand, within PFLU_RS18360 at 4163.936 kb on + strand, within PFLU_RS18360 at 4163.937 kb on - strand, within PFLU_RS18360 at 4163.937 kb on - strand, within PFLU_RS18360 at 4163.937 kb on - strand, within PFLU_RS18360 at 4163.937 kb on - strand, within PFLU_RS18360 at 4163.937 kb on - strand, within PFLU_RS18360 at 4163.937 kb on - strand, within PFLU_RS18360 at 4163.937 kb on - strand, within PFLU_RS18360 at 4163.937 kb on - strand, within PFLU_RS18360 at 4163.937 kb on - strand, within PFLU_RS18360 at 4164.017 kb on - strand, within PFLU_RS18360 at 4164.017 kb on - strand, within PFLU_RS18360 at 4164.041 kb on + strand, within PFLU_RS18360 at 4164.041 kb on + strand, within PFLU_RS18360 at 4164.041 kb on + strand, within PFLU_RS18360 at 4164.041 kb on + strand, within PFLU_RS18360 at 4164.041 kb on + strand, within PFLU_RS18360 at 4164.041 kb on + strand, within PFLU_RS18360 at 4164.041 kb on + strand, within PFLU_RS18360 at 4164.041 kb on + strand, within PFLU_RS18360 at 4164.041 kb on + strand, within PFLU_RS18360 at 4164.041 kb on + strand, within PFLU_RS18360 at 4164.042 kb on - strand, within PFLU_RS18360 at 4164.042 kb on - strand, within PFLU_RS18360 at 4164.042 kb on - strand, within PFLU_RS18360 at 4164.042 kb on - strand, within PFLU_RS18360 at 4164.042 kb on - strand, within PFLU_RS18360 at 4164.042 kb on - strand, within PFLU_RS18360 at 4164.042 kb on - strand, within PFLU_RS18360 at 4164.042 kb on - strand, within PFLU_RS18360 at 4164.042 kb on - strand, within PFLU_RS18360 at 4164.042 kb on - strand, within PFLU_RS18360 at 4164.042 kb on - strand, within PFLU_RS18360 at 4164.042 kb on - strand, within PFLU_RS18360 at 4164.042 kb on - strand, within PFLU_RS18360 at 4164.153 kb on - strand, within PFLU_RS18360 at 4164.233 kb on + strand, within PFLU_RS18360 at 4164.233 kb on + strand, within PFLU_RS18360 at 4164.233 kb on + strand, within PFLU_RS18360 at 4164.234 kb on - strand, within PFLU_RS18360 at 4164.234 kb on - strand, within PFLU_RS18360
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C)(N); with TAPS remove 4,162,231 + -2.5 4,162,235 + +0.0 4,162,235 + -2.1 4,162,235 + -0.7 4,162,235 + +1.9 4,162,235 + +1.1 4,162,284 + +0.2 4,162,324 + -0.7 4,162,363 + +0.4 4,162,381 + -0.4 4,162,419 + +1.0 4,162,419 + -0.1 4,162,419 + +0.5 4,162,494 + -0.2 4,162,495 - +0.1 4,162,495 - -0.6 4,162,510 + -0.2 4,162,522 + -0.7 4,162,523 - +0.8 4,162,570 + -0.7 4,162,570 + -0.2 4,162,624 - PFLU_RS18345 0.16 +0.3 4,162,659 + PFLU_RS18345 0.22 -0.1 4,162,680 - PFLU_RS18345 0.25 -1.8 4,162,697 - PFLU_RS18345 0.28 -0.0 4,162,767 - PFLU_RS18345 0.39 -1.2 4,162,767 - PFLU_RS18345 0.39 +0.2 4,162,784 + PFLU_RS18345 0.42 +1.0 4,162,785 - PFLU_RS18345 0.42 -1.9 4,162,811 + PFLU_RS18345 0.46 -1.8 4,162,822 + PFLU_RS18345 0.48 -0.4 4,162,823 - PFLU_RS18345 0.48 +0.6 4,162,823 - PFLU_RS18345 0.48 -0.2 4,162,823 - PFLU_RS18345 0.48 -0.0 4,162,825 + PFLU_RS18345 0.48 +0.4 4,162,864 + PFLU_RS18345 0.55 +0.4 4,162,864 + PFLU_RS18345 0.55 +0.5 4,162,866 + PFLU_RS18345 0.55 -0.3 4,162,913 + PFLU_RS18345 0.62 -1.2 4,162,913 + PFLU_RS18345 0.62 -0.9 4,162,950 - PFLU_RS18345 0.68 -0.2 4,162,972 + PFLU_RS18345 0.72 -0.6 4,162,972 + PFLU_RS18345 0.72 +1.8 4,162,972 + PFLU_RS18345 0.72 -0.9 4,163,053 + PFLU_RS18345 0.85 -0.2 4,163,054 - PFLU_RS18345 0.85 -2.6 4,163,103 + +0.1 4,163,103 + +0.6 4,163,104 - -0.4 4,163,116 - +0.4 4,163,211 - PFLU_RS18350 0.18 +0.2 4,163,287 + PFLU_RS18350 0.74 +2.1 4,163,287 + PFLU_RS18350 0.74 +2.1 4,163,287 + PFLU_RS18350 0.74 +0.8 4,163,307 + PFLU_RS18350 0.89 +1.4 4,163,499 + -1.9 4,163,500 - -0.1 4,163,500 - +0.4 4,163,526 + -0.8 4,163,526 + +0.7 4,163,526 + +0.5 4,163,526 + -1.7 4,163,526 + -0.6 4,163,526 + +0.5 4,163,527 - -2.2 4,163,527 - -0.3 4,163,527 - +0.0 4,163,527 - -0.5 4,163,527 - +0.6 4,163,527 - +0.2 4,163,527 - -1.7 4,163,543 + -1.5 4,163,543 + -0.4 4,163,543 + +1.9 4,163,544 - +0.1 4,163,544 - -1.8 4,163,544 - +1.3 4,163,544 - -0.4 4,163,544 - +3.0 4,163,544 - -2.1 4,163,544 - +0.1 4,163,547 + -0.5 4,163,547 + +0.1 4,163,548 - -2.8 4,163,608 - +1.4 4,163,608 - -0.3 4,163,725 - -0.6 4,163,725 - -1.0 4,163,725 - +0.6 4,163,725 - +0.1 4,163,725 - +1.4 4,163,725 - +0.5 4,163,725 - +0.4 4,163,728 - +0.4 4,163,728 - -0.9 4,163,799 + -0.1 4,163,799 + -0.6 4,163,813 + +1.7 4,163,874 - -0.2 4,163,874 - +0.8 4,163,936 + PFLU_RS18360 0.12 -0.8 4,163,936 + PFLU_RS18360 0.12 -1.3 4,163,936 + PFLU_RS18360 0.12 -1.4 4,163,936 + PFLU_RS18360 0.12 -0.6 4,163,936 + PFLU_RS18360 0.12 -0.3 4,163,936 + PFLU_RS18360 0.12 +0.2 4,163,936 + PFLU_RS18360 0.12 -0.2 4,163,937 - PFLU_RS18360 0.12 -0.6 4,163,937 - PFLU_RS18360 0.12 -2.6 4,163,937 - PFLU_RS18360 0.12 -1.4 4,163,937 - PFLU_RS18360 0.12 -0.2 4,163,937 - PFLU_RS18360 0.12 -0.7 4,163,937 - PFLU_RS18360 0.12 +0.3 4,163,937 - PFLU_RS18360 0.12 -1.2 4,163,937 - PFLU_RS18360 0.12 +0.4 4,163,937 - PFLU_RS18360 0.12 +1.4 4,164,017 - PFLU_RS18360 0.24 +0.6 4,164,017 - PFLU_RS18360 0.24 -0.9 4,164,041 + PFLU_RS18360 0.27 -0.6 4,164,041 + PFLU_RS18360 0.27 +1.4 4,164,041 + PFLU_RS18360 0.27 -0.8 4,164,041 + PFLU_RS18360 0.27 -0.9 4,164,041 + PFLU_RS18360 0.27 +0.2 4,164,041 + PFLU_RS18360 0.27 -0.1 4,164,041 + PFLU_RS18360 0.27 +0.6 4,164,041 + PFLU_RS18360 0.27 -1.3 4,164,041 + PFLU_RS18360 0.27 +0.4 4,164,041 + PFLU_RS18360 0.27 +0.7 4,164,042 - PFLU_RS18360 0.27 -1.5 4,164,042 - PFLU_RS18360 0.27 -0.4 4,164,042 - PFLU_RS18360 0.27 +0.4 4,164,042 - PFLU_RS18360 0.27 +0.1 4,164,042 - PFLU_RS18360 0.27 +0.4 4,164,042 - PFLU_RS18360 0.27 +0.4 4,164,042 - PFLU_RS18360 0.27 -0.9 4,164,042 - PFLU_RS18360 0.27 +1.0 4,164,042 - PFLU_RS18360 0.27 +0.1 4,164,042 - PFLU_RS18360 0.27 -1.3 4,164,042 - PFLU_RS18360 0.27 -0.0 4,164,042 - PFLU_RS18360 0.27 +0.4 4,164,042 - PFLU_RS18360 0.27 -0.5 4,164,153 - PFLU_RS18360 0.44 -0.2 4,164,233 + PFLU_RS18360 0.56 -1.0 4,164,233 + PFLU_RS18360 0.56 +0.4 4,164,233 + PFLU_RS18360 0.56 -1.4 4,164,234 - PFLU_RS18360 0.56 +0.4 4,164,234 - PFLU_RS18360 0.56 -1.6
Or see this region's nucleotide sequence