Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS12040

Experiment: L-Glutamine (C)(N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamine (C)(N); with TAPS
2,675,693	+		PFLU_RS12035	0.41	-2.0
2,675,694	-		PFLU_RS12035	0.41	+0.1
2,675,778	+		PFLU_RS12035	0.47	+0.5
2,675,778	+		PFLU_RS12035	0.47	+0.3
2,675,779	-		PFLU_RS12035	0.47	-0.0
2,675,779	-		PFLU_RS12035	0.47	-0.8
2,675,808	+		PFLU_RS12035	0.49	-0.1
2,675,808	+		PFLU_RS12035	0.49	-0.7
2,675,809	-		PFLU_RS12035	0.49	+0.3
2,675,809	-		PFLU_RS12035	0.49	+0.9
2,675,869	+		PFLU_RS12035	0.53	-0.7
2,675,869	+		PFLU_RS12035	0.53	-0.5
2,675,975	+		PFLU_RS12035	0.59	+1.7
2,675,975	+		PFLU_RS12035	0.59	-2.3
2,675,975	+		PFLU_RS12035	0.59	-0.7
2,675,975	+		PFLU_RS12035	0.59	-1.2
2,675,975	+		PFLU_RS12035	0.59	-0.0
2,675,975	+		PFLU_RS12035	0.59	-0.3
2,675,975	+		PFLU_RS12035	0.59	-0.8
2,675,975	+		PFLU_RS12035	0.59	+0.7
2,675,975	+		PFLU_RS12035	0.59	-1.0
2,675,975	+		PFLU_RS12035	0.59	-0.3
2,675,976	-		PFLU_RS12035	0.59	+0.1
2,675,976	-		PFLU_RS12035	0.59	+0.7
2,675,976	-		PFLU_RS12035	0.59	-0.3
2,675,976	-		PFLU_RS12035	0.59	-1.7
2,675,976	-		PFLU_RS12035	0.59	+0.0
2,675,976	-		PFLU_RS12035	0.59	+0.3
2,675,976	-		PFLU_RS12035	0.59	-0.0
2,675,976	-		PFLU_RS12035	0.59	+0.7
2,675,976	-		PFLU_RS12035	0.59	+0.7
2,675,976	-		PFLU_RS12035	0.59	-0.2
2,675,976	-		PFLU_RS12035	0.59	+0.3
2,675,976	-		PFLU_RS12035	0.59	+0.8
2,675,977	+		PFLU_RS12035	0.60	+0.1
2,675,978	-		PFLU_RS12035	0.60	+0.5
2,676,075	+		PFLU_RS12035	0.66	-1.2
2,676,114	-		PFLU_RS12035	0.68	-0.7
2,676,192	+		PFLU_RS12035	0.73	-0.7
2,676,192	+		PFLU_RS12035	0.73	+0.2
2,676,193	-		PFLU_RS12035	0.73	-0.3
2,676,348	-		PFLU_RS12035	0.83	-0.7
2,676,375	-		PFLU_RS12035	0.85	-0.2
2,676,551	-				+0.1
2,676,551	-				-0.2
2,676,607	-				-0.9
2,676,788	+		PFLU_RS12040	0.11	-1.2
2,676,788	+		PFLU_RS12040	0.11	+2.3
2,676,788	+		PFLU_RS12040	0.11	+1.0
2,676,788	+		PFLU_RS12040	0.11	+0.2
2,676,788	+		PFLU_RS12040	0.11	-0.0
2,676,788	+		PFLU_RS12040	0.11	-0.3
2,676,789	-		PFLU_RS12040	0.11	+0.9
2,676,789	-		PFLU_RS12040	0.11	-0.1
2,676,789	-		PFLU_RS12040	0.11	+1.0
2,676,843	-		PFLU_RS12040	0.15	+0.8
2,676,843	-		PFLU_RS12040	0.15	+1.0
2,676,960	-		PFLU_RS12040	0.24	+1.5
2,676,961	+		PFLU_RS12040	0.24	+1.0
2,676,961	+		PFLU_RS12040	0.24	+1.3
2,676,961	+		PFLU_RS12040	0.24	-0.1
2,676,961	+		PFLU_RS12040	0.24	+0.5
2,676,961	+		PFLU_RS12040	0.24	-0.1
2,676,961	+		PFLU_RS12040	0.24	+1.5
2,676,961	+		PFLU_RS12040	0.24	+1.1
2,676,962	-		PFLU_RS12040	0.24	+0.4
2,676,962	-		PFLU_RS12040	0.24	+0.7
2,676,962	-		PFLU_RS12040	0.24	-0.0
2,677,108	+		PFLU_RS12040	0.35	+0.3
2,677,108	+		PFLU_RS12040	0.35	-0.3
2,677,113	+		PFLU_RS12040	0.35	-0.3
2,677,213	-		PFLU_RS12040	0.43	+0.4
2,677,292	+		PFLU_RS12040	0.49	+0.1
2,677,306	+		PFLU_RS12040	0.50	-2.8
2,677,340	+		PFLU_RS12040	0.53	+0.8
2,677,340	+		PFLU_RS12040	0.53	+0.8
2,677,387	-		PFLU_RS12040	0.56	+0.3
2,677,387	-		PFLU_RS12040	0.56	+0.7
2,677,498	+		PFLU_RS12040	0.64	-0.7
2,677,499	-		PFLU_RS12040	0.65	+0.4
2,677,499	-		PFLU_RS12040	0.65	+0.7
2,677,539	-		PFLU_RS12040	0.68	-2.0
2,677,664	+		PFLU_RS12040	0.77	+0.2
2,677,665	-		PFLU_RS12040	0.77	+0.2
2,677,826	+		PFLU_RS12040	0.89	+3.6
2,677,996	-				-1.7
2,678,019	+				+1.0
2,678,019	+				-0.3
2,678,019	+				-0.6
2,678,019	+				+1.5
2,678,019	+				+1.3
2,678,020	-				-1.2
2,678,020	-				-1.5
2,678,020	-				-0.7
2,678,020	-				+1.5
2,678,020	-				-1.1
2,678,020	-				-2.5
2,678,020	-				-0.7
2,678,184	+		PFLU_RS12045	0.50	+0.3
2,678,184	+		PFLU_RS12045	0.50	+0.3
2,678,184	+		PFLU_RS12045	0.50	+0.8
2,678,184	+		PFLU_RS12045	0.50	+1.1
2,678,184	+		PFLU_RS12045	0.50	+0.4
2,678,184	+		PFLU_RS12045	0.50	-0.5
2,678,184	+		PFLU_RS12045	0.50	-0.3
2,678,184	+		PFLU_RS12045	0.50	-0.3
2,678,185	-		PFLU_RS12045	0.51	+0.7
2,678,185	-		PFLU_RS12045	0.51	+0.5
2,678,185	-		PFLU_RS12045	0.51	-1.7
2,678,185	-		PFLU_RS12045	0.51	+2.3
2,678,207	+		PFLU_RS12045	0.56	+0.6
2,678,207	+		PFLU_RS12045	0.56	-0.4
2,678,207	+		PFLU_RS12045	0.56	-0.0
2,678,208	-		PFLU_RS12045	0.57	-0.3
2,678,208	-		PFLU_RS12045	0.57	-1.0
2,678,268	+		PFLU_RS12045	0.72	+0.0
2,678,268	+		PFLU_RS12045	0.72	-0.3
2,678,268	+		PFLU_RS12045	0.72	-1.6
2,678,268	+		PFLU_RS12045	0.72	-1.1
2,678,268	+		PFLU_RS12045	0.72	+0.9
2,678,269	-		PFLU_RS12045	0.73	+1.4
2,678,269	-		PFLU_RS12045	0.73	-0.8
2,678,269	-		PFLU_RS12045	0.73	+0.3
2,678,339	+				-1.9
2,678,339	+				+0.4
2,678,340	-				+0.3
2,678,347	+				+0.3
2,678,348	-				+0.4
2,678,398	+		PFLU_RS12050	0.12	-1.3
2,678,398	+		PFLU_RS12050	0.12	+0.3
2,678,398	+		PFLU_RS12050	0.12	+3.3
2,678,398	+		PFLU_RS12050	0.12	+0.3
2,678,398	+		PFLU_RS12050	0.12	+1.7
2,678,445	+		PFLU_RS12050	0.32	-1.0
2,678,445	+		PFLU_RS12050	0.32	+0.1
2,678,445	+		PFLU_RS12050	0.32	+0.0
2,678,446	-		PFLU_RS12050	0.33	-0.4
2,678,446	-		PFLU_RS12050	0.33	-1.2
2,678,454	+		PFLU_RS12050	0.36	+0.3
2,678,454	+		PFLU_RS12050	0.36	+1.4
2,678,454	+		PFLU_RS12050	0.36	-0.3
2,678,454	+		PFLU_RS12050	0.36	-0.4
2,678,454	+		PFLU_RS12050	0.36	-1.3
2,678,455	-		PFLU_RS12050	0.36	-0.6
2,678,455	-		PFLU_RS12050	0.36	+0.2
2,678,529	+		PFLU_RS12050	0.67	+0.6
2,678,530	-		PFLU_RS12050	0.68	-0.7
2,678,530	-		PFLU_RS12050	0.68	-0.3
2,678,574	+		PFLU_RS12050	0.86	-0.4
2,678,575	-		PFLU_RS12050	0.86	+1.1
2,678,575	-		PFLU_RS12050	0.86	-0.0
2,678,580	+		PFLU_RS12050	0.88	-0.7
2,678,580	+		PFLU_RS12050	0.88	+0.4
2,678,580	+		PFLU_RS12050	0.88	+1.3
2,678,581	-		PFLU_RS12050	0.89	-0.3
2,678,581	-		PFLU_RS12050	0.89	+0.0
2,678,602	-				-0.0
2,678,634	+				+2.6
2,678,646	+				+0.9
2,678,697	-				-1.4
2,678,697	-				-2.3
2,678,697	-				-1.4
2,678,715	-				-1.2
2,678,770	+				-1.5
2,678,770	+				+0.2
2,678,770	+				-0.1
2,678,770	+				+0.9
2,678,770	+				+0.1
2,678,770	+				-0.7
2,678,770	+				+1.9
2,678,771	-				+0.3
2,678,771	-				-0.3
2,678,771	-				+0.5
2,678,771	-				-0.9
2,678,771	-				+0.9
2,678,771	-				-1.0
2,678,771	-				+0.7
2,678,771	-				-1.0
2,678,771	-				+0.1
2,678,771	-				-0.0
2,678,771	-				-0.6
2,678,771	-				-1.7
2,678,785	+				-0.7
2,678,785	+				-2.0
2,678,785	+				+1.3
2,678,786	-				-0.2
2,678,786	-				+0.0
2,678,786	-				+0.4
2,678,812	+				+0.3
2,678,812	+				+1.1
2,678,812	+				-2.0
2,678,812	+				-0.5
2,678,812	+				-0.9
2,678,813	-				-0.1
2,678,813	-				+0.3
2,678,813	-				-1.0
2,678,813	-				-0.7
2,678,813	-				-0.1
2,678,813	-				-2.4
2,678,813	-				+1.1
2,678,813	-				-0.7
2,678,813	-				-1.5
2,678,813	-				-0.3
2,678,813	-				-2.2
2,678,813	-				-0.0
2,678,816	+				-2.0
2,678,816	+				+2.3
2,678,816	+				-1.2
2,678,816	+				+1.3
2,678,816	+				+0.9
2,678,816	+				+0.8
2,678,816	+				-1.7
2,678,816	+				-1.3
2,678,816	+				+0.6
2,678,816	+				-1.3
2,678,816	+				+1.6
2,678,816	+				+1.3
2,678,816	+				+3.3
2,678,816	+				+1.3
2,678,816	+				-0.2
2,678,816	+				-1.5
2,678,816	+				+0.1
2,678,816	+				+0.7
2,678,816	+				+0.7
2,678,816	+				-0.9
2,678,817	-				+1.3
2,678,817	-				+3.1
2,678,817	-				+1.7
2,678,817	-				+2.1
2,678,817	-				+0.2
2,678,817	-				+0.9
2,678,817	-				-0.4
2,678,817	-				+1.3
2,678,817	-				-0.9
2,678,817	-				+0.1
2,678,817	-				-1.0
2,678,817	-				+1.7
2,678,817	-				-1.0
2,678,817	-				+1.1
2,678,817	-				+0.7
2,678,817	-				+1.3
2,678,817	-				+0.8
2,678,817	-				-0.0
2,678,817	-				+2.0
2,678,817	-				-1.5
2,678,817	-				-1.0
2,678,817	-				-1.3
2,678,817	-				-1.0
2,678,834	+				+0.7
2,678,834	+				-2.8
2,678,834	+				-0.0
2,678,834	+				+2.6
2,678,835	-				-1.3
2,678,835	-				-1.7
2,678,841	+				+1.1
2,678,842	-				-0.3
2,678,842	-				+0.8
2,678,842	-				-0.8
2,678,930	+				+1.0
2,678,931	-				-0.7
2,678,931	-				-0.2