Experiment: Cobalt chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5952 and Pf6N2E2_5953 are separated by 191 nucleotides Pf6N2E2_5953 and Pf6N2E2_5954 are separated by 144 nucleotides Pf6N2E2_5954 and Pf6N2E2_5955 overlap by 1 nucleotides Pf6N2E2_5955 and Pf6N2E2_5956 are separated by 18 nucleotides
Pf6N2E2_5952 - 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100), at 6,771,895 to 6,772,638
_5952
Pf6N2E2_5953 - Acyl carrier protein, at 6,772,830 to 6,773,066
_5953
Pf6N2E2_5954 - 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179), at 6,773,211 to 6,774,419
_5954
Pf6N2E2_5955 - Aminodeoxychorismate lyase (EC 4.1.3.38), at 6,774,419 to 6,775,234
_5955
Pf6N2E2_5956 - FIG004453: protein YceG like, at 6,775,253 to 6,776,398
_5956
Position (kb)
6773
6774
6775 Strain fitness (log2 ratio)
-1
0
1
2 at 6772.627 kb on + strand at 6772.627 kb on + strand at 6772.627 kb on + strand at 6772.627 kb on + strand at 6772.627 kb on + strand at 6772.627 kb on + strand at 6772.627 kb on + strand at 6772.627 kb on + strand at 6772.627 kb on + strand at 6772.627 kb on + strand at 6772.627 kb on + strand at 6772.668 kb on + strand at 6772.668 kb on + strand at 6772.691 kb on + strand at 6772.772 kb on + strand at 6773.646 kb on + strand, within Pf6N2E2_5954 at 6774.156 kb on + strand, within Pf6N2E2_5954 at 6774.626 kb on + strand, within Pf6N2E2_5955 at 6774.627 kb on - strand, within Pf6N2E2_5955 at 6774.894 kb on - strand, within Pf6N2E2_5955 at 6774.894 kb on - strand, within Pf6N2E2_5955 at 6774.916 kb on + strand, within Pf6N2E2_5955 at 6774.916 kb on + strand, within Pf6N2E2_5955 at 6774.917 kb on - strand, within Pf6N2E2_5955 at 6774.917 kb on - strand, within Pf6N2E2_5955 at 6775.032 kb on + strand, within Pf6N2E2_5955 at 6775.033 kb on - strand, within Pf6N2E2_5955 at 6775.246 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.6 mM remove 6,772,627 + +1.2 6,772,627 + +0.6 6,772,627 + +0.2 6,772,627 + -1.3 6,772,627 + +1.5 6,772,627 + -0.2 6,772,627 + -0.2 6,772,627 + +1.1 6,772,627 + +1.8 6,772,627 + +1.1 6,772,627 + +1.4 6,772,668 + +1.2 6,772,668 + +0.2 6,772,691 + +0.3 6,772,772 + -0.2 6,773,646 + Pf6N2E2_5954 0.36 +1.8 6,774,156 + Pf6N2E2_5954 0.78 +0.8 6,774,626 + Pf6N2E2_5955 0.25 -0.2 6,774,627 - Pf6N2E2_5955 0.25 +0.3 6,774,894 - Pf6N2E2_5955 0.58 +0.8 6,774,894 - Pf6N2E2_5955 0.58 -0.7 6,774,916 + Pf6N2E2_5955 0.61 -0.3 6,774,916 + Pf6N2E2_5955 0.61 -0.5 6,774,917 - Pf6N2E2_5955 0.61 +0.8 6,774,917 - Pf6N2E2_5955 0.61 -1.5 6,775,032 + Pf6N2E2_5955 0.75 +0.8 6,775,033 - Pf6N2E2_5955 0.75 +0.8 6,775,246 + -1.2
Or see this region's nucleotide sequence