Experiment: Cobalt chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5870 and Pf6N2E2_5871 are separated by 11 nucleotides Pf6N2E2_5871 and Pf6N2E2_5872 are separated by 248 nucleotides
Pf6N2E2_5870 - 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41), at 6,689,489 to 6,690,709
_5870
Pf6N2E2_5871 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabA form (EC 4.2.1.59), at 6,690,721 to 6,691,236
_5871
Pf6N2E2_5872 - Sensor histidine kinase/response regulator, at 6,691,485 to 6,693,386
_5872
Position (kb)
6690
6691
6692 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6691.374 kb on - strand at 6691.374 kb on - strand at 6691.374 kb on - strand at 6691.430 kb on - strand at 6691.486 kb on + strand at 6691.486 kb on + strand at 6691.486 kb on + strand at 6691.487 kb on - strand at 6691.487 kb on - strand at 6691.487 kb on - strand at 6691.547 kb on - strand at 6691.547 kb on - strand at 6691.734 kb on + strand, within Pf6N2E2_5872 at 6691.734 kb on + strand, within Pf6N2E2_5872 at 6691.734 kb on + strand, within Pf6N2E2_5872 at 6691.734 kb on + strand, within Pf6N2E2_5872 at 6691.735 kb on - strand, within Pf6N2E2_5872 at 6691.836 kb on + strand, within Pf6N2E2_5872 at 6691.836 kb on + strand, within Pf6N2E2_5872 at 6691.836 kb on + strand, within Pf6N2E2_5872 at 6691.837 kb on - strand, within Pf6N2E2_5872 at 6691.837 kb on - strand, within Pf6N2E2_5872 at 6691.837 kb on - strand, within Pf6N2E2_5872 at 6691.837 kb on - strand, within Pf6N2E2_5872 at 6691.837 kb on - strand, within Pf6N2E2_5872 at 6691.837 kb on - strand, within Pf6N2E2_5872 at 6691.837 kb on - strand, within Pf6N2E2_5872 at 6691.837 kb on - strand, within Pf6N2E2_5872 at 6691.837 kb on - strand, within Pf6N2E2_5872
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.6 mM remove 6,691,374 - +0.6 6,691,374 - -0.6 6,691,374 - +0.9 6,691,430 - +0.0 6,691,486 + -1.0 6,691,486 + -0.4 6,691,486 + -2.3 6,691,487 - -0.4 6,691,487 - -0.4 6,691,487 - -0.0 6,691,547 - +0.9 6,691,547 - -0.4 6,691,734 + Pf6N2E2_5872 0.13 +0.0 6,691,734 + Pf6N2E2_5872 0.13 -0.7 6,691,734 + Pf6N2E2_5872 0.13 -1.9 6,691,734 + Pf6N2E2_5872 0.13 +0.9 6,691,735 - Pf6N2E2_5872 0.13 -1.1 6,691,836 + Pf6N2E2_5872 0.18 +0.8 6,691,836 + Pf6N2E2_5872 0.18 -0.4 6,691,836 + Pf6N2E2_5872 0.18 -0.9 6,691,837 - Pf6N2E2_5872 0.19 -1.5 6,691,837 - Pf6N2E2_5872 0.19 +0.0 6,691,837 - Pf6N2E2_5872 0.19 +0.5 6,691,837 - Pf6N2E2_5872 0.19 +0.2 6,691,837 - Pf6N2E2_5872 0.19 -0.3 6,691,837 - Pf6N2E2_5872 0.19 +1.9 6,691,837 - Pf6N2E2_5872 0.19 -0.2 6,691,837 - Pf6N2E2_5872 0.19 -0.5 6,691,837 - Pf6N2E2_5872 0.19 +0.1
Or see this region's nucleotide sequence