Experiment: Cobalt chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_578 and Pf6N2E2_579 overlap by 4 nucleotides Pf6N2E2_579 and Pf6N2E2_580 are separated by 787 nucleotides Pf6N2E2_580 and Pf6N2E2_581 are separated by 19 nucleotides
Pf6N2E2_578 - Mobile element protein, at 653,703 to 654,038
_578
Pf6N2E2_579 - FIG00962753: hypothetical protein, at 654,035 to 654,229
_579
Pf6N2E2_580 - Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9), at 655,017 to 655,811
_580
Pf6N2E2_581 - Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1), at 655,831 to 657,441
_581
Position (kb) 655
656 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 654.053 kb on + strand at 654.054 kb on - strand at 654.178 kb on + strand, within Pf6N2E2_579 at 654.179 kb on - strand, within Pf6N2E2_579 at 654.381 kb on - strand at 654.388 kb on + strand at 654.388 kb on + strand at 654.447 kb on + strand at 654.468 kb on + strand at 654.469 kb on - strand at 654.469 kb on - strand at 654.865 kb on + strand at 654.866 kb on - strand at 654.873 kb on + strand at 654.873 kb on + strand at 654.873 kb on + strand at 654.873 kb on + strand at 654.873 kb on + strand at 654.873 kb on + strand at 654.873 kb on + strand at 654.925 kb on + strand at 654.925 kb on + strand at 654.926 kb on - strand at 654.936 kb on - strand at 654.936 kb on - strand at 654.936 kb on - strand at 655.018 kb on + strand at 655.882 kb on - strand at 655.882 kb on - strand at 655.882 kb on - strand at 655.882 kb on - strand at 655.882 kb on - strand at 655.882 kb on - strand at 655.882 kb on - strand at 655.882 kb on - strand at 655.882 kb on - strand at 655.884 kb on - strand at 655.884 kb on - strand at 656.010 kb on - strand, within Pf6N2E2_581 at 656.010 kb on - strand, within Pf6N2E2_581 at 656.010 kb on - strand, within Pf6N2E2_581 at 656.022 kb on - strand, within Pf6N2E2_581 at 656.022 kb on - strand, within Pf6N2E2_581 at 656.022 kb on - strand, within Pf6N2E2_581 at 656.071 kb on - strand, within Pf6N2E2_581 at 656.210 kb on - strand, within Pf6N2E2_581 at 656.300 kb on - strand, within Pf6N2E2_581 at 656.300 kb on - strand, within Pf6N2E2_581 at 656.300 kb on - strand, within Pf6N2E2_581 at 656.550 kb on - strand, within Pf6N2E2_581 at 656.550 kb on - strand, within Pf6N2E2_581 at 656.550 kb on - strand, within Pf6N2E2_581 at 656.550 kb on - strand, within Pf6N2E2_581 at 656.550 kb on - strand, within Pf6N2E2_581 at 656.550 kb on - strand, within Pf6N2E2_581 at 656.550 kb on - strand, within Pf6N2E2_581 at 656.758 kb on + strand, within Pf6N2E2_581 at 656.758 kb on + strand, within Pf6N2E2_581 at 656.758 kb on + strand, within Pf6N2E2_581 at 656.758 kb on + strand, within Pf6N2E2_581 at 656.758 kb on + strand, within Pf6N2E2_581 at 656.758 kb on + strand, within Pf6N2E2_581 at 656.758 kb on + strand, within Pf6N2E2_581 at 656.759 kb on - strand, within Pf6N2E2_581 at 656.759 kb on - strand, within Pf6N2E2_581 at 656.759 kb on - strand, within Pf6N2E2_581 at 656.759 kb on - strand, within Pf6N2E2_581
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.6 mM remove 654,053 + +1.4 654,054 - +0.3 654,178 + Pf6N2E2_579 0.73 +0.5 654,179 - Pf6N2E2_579 0.74 +0.7 654,381 - -0.8 654,388 + +0.1 654,388 + -1.1 654,447 + -0.8 654,468 + -0.1 654,469 - -0.5 654,469 - -0.5 654,865 + +1.5 654,866 - -0.1 654,873 + -0.0 654,873 + +0.6 654,873 + +0.1 654,873 + +0.4 654,873 + +0.3 654,873 + -0.4 654,873 + -0.5 654,925 + -0.1 654,925 + -0.2 654,926 - -0.5 654,936 - +0.2 654,936 - -0.7 654,936 - -1.1 655,018 + +0.4 655,882 - -1.7 655,882 - +0.7 655,882 - +0.3 655,882 - +2.6 655,882 - +0.2 655,882 - -0.6 655,882 - +0.4 655,882 - -0.1 655,882 - -0.1 655,884 - -0.0 655,884 - -3.2 656,010 - Pf6N2E2_581 0.11 +0.2 656,010 - Pf6N2E2_581 0.11 +1.5 656,010 - Pf6N2E2_581 0.11 +0.3 656,022 - Pf6N2E2_581 0.12 -2.1 656,022 - Pf6N2E2_581 0.12 +0.0 656,022 - Pf6N2E2_581 0.12 -2.3 656,071 - Pf6N2E2_581 0.15 -1.5 656,210 - Pf6N2E2_581 0.24 -1.1 656,300 - Pf6N2E2_581 0.29 +0.2 656,300 - Pf6N2E2_581 0.29 +0.5 656,300 - Pf6N2E2_581 0.29 -2.9 656,550 - Pf6N2E2_581 0.45 +0.1 656,550 - Pf6N2E2_581 0.45 +1.0 656,550 - Pf6N2E2_581 0.45 -1.5 656,550 - Pf6N2E2_581 0.45 -2.1 656,550 - Pf6N2E2_581 0.45 +0.3 656,550 - Pf6N2E2_581 0.45 -0.7 656,550 - Pf6N2E2_581 0.45 +0.3 656,758 + Pf6N2E2_581 0.58 +0.8 656,758 + Pf6N2E2_581 0.58 +0.3 656,758 + Pf6N2E2_581 0.58 +0.1 656,758 + Pf6N2E2_581 0.58 -0.2 656,758 + Pf6N2E2_581 0.58 +1.2 656,758 + Pf6N2E2_581 0.58 +0.3 656,758 + Pf6N2E2_581 0.58 +0.4 656,759 - Pf6N2E2_581 0.58 -0.5 656,759 - Pf6N2E2_581 0.58 -1.0 656,759 - Pf6N2E2_581 0.58 -0.1 656,759 - Pf6N2E2_581 0.58 +0.3
Or see this region's nucleotide sequence