Experiment: Cobalt chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5602 and Pf6N2E2_5603 are separated by 59 nucleotides Pf6N2E2_5603 and Pf6N2E2_5604 are separated by 164 nucleotides Pf6N2E2_5604 and Pf6N2E2_5605 are separated by 66 nucleotides
Pf6N2E2_5602 - Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like, at 6,417,491 to 6,418,585
_5602
Pf6N2E2_5603 - 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100), at 6,418,645 to 6,419,403
_5603
Pf6N2E2_5604 - Putative heme iron utilization protein, at 6,419,568 to 6,420,299
_5604
Pf6N2E2_5605 - FxsA protein, at 6,420,366 to 6,420,842
_5605
Position (kb)
6418
6419
6420 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6418.646 kb on + strand at 6418.646 kb on + strand at 6418.646 kb on + strand at 6418.646 kb on + strand at 6418.647 kb on - strand at 6418.647 kb on - strand at 6418.688 kb on + strand at 6418.688 kb on + strand at 6418.688 kb on + strand at 6418.688 kb on + strand at 6418.688 kb on + strand at 6418.689 kb on - strand at 6418.689 kb on - strand at 6418.689 kb on - strand at 6418.689 kb on - strand at 6418.689 kb on - strand at 6418.689 kb on - strand at 6418.691 kb on + strand at 6418.692 kb on - strand at 6418.707 kb on + strand at 6418.707 kb on + strand at 6418.707 kb on + strand at 6418.708 kb on - strand at 6418.708 kb on - strand at 6418.708 kb on - strand at 6418.709 kb on + strand at 6418.709 kb on + strand at 6418.709 kb on + strand at 6418.709 kb on + strand at 6418.709 kb on + strand at 6418.709 kb on + strand at 6418.709 kb on + strand at 6418.710 kb on - strand at 6418.710 kb on - strand at 6418.710 kb on - strand at 6418.710 kb on - strand at 6418.710 kb on - strand at 6418.710 kb on - strand at 6418.919 kb on + strand, within Pf6N2E2_5603 at 6418.919 kb on + strand, within Pf6N2E2_5603 at 6418.919 kb on + strand, within Pf6N2E2_5603 at 6418.920 kb on - strand, within Pf6N2E2_5603 at 6418.920 kb on - strand, within Pf6N2E2_5603 at 6418.920 kb on - strand, within Pf6N2E2_5603 at 6418.920 kb on - strand, within Pf6N2E2_5603 at 6418.920 kb on - strand, within Pf6N2E2_5603 at 6419.228 kb on + strand, within Pf6N2E2_5603 at 6419.228 kb on + strand, within Pf6N2E2_5603 at 6419.228 kb on + strand, within Pf6N2E2_5603 at 6419.229 kb on - strand, within Pf6N2E2_5603 at 6419.376 kb on + strand at 6419.376 kb on + strand at 6419.383 kb on + strand at 6419.383 kb on + strand at 6419.383 kb on + strand at 6419.384 kb on - strand at 6419.384 kb on - strand at 6419.384 kb on - strand at 6419.384 kb on - strand at 6419.384 kb on - strand at 6419.496 kb on + strand at 6419.497 kb on - strand at 6419.497 kb on - strand at 6419.540 kb on - strand at 6419.564 kb on + strand at 6419.565 kb on - strand at 6419.565 kb on - strand at 6419.617 kb on - strand at 6419.826 kb on + strand, within Pf6N2E2_5604 at 6419.886 kb on + strand, within Pf6N2E2_5604 at 6419.886 kb on + strand, within Pf6N2E2_5604 at 6419.889 kb on + strand, within Pf6N2E2_5604 at 6419.889 kb on + strand, within Pf6N2E2_5604 at 6419.889 kb on + strand, within Pf6N2E2_5604 at 6419.890 kb on - strand, within Pf6N2E2_5604 at 6419.896 kb on - strand, within Pf6N2E2_5604 at 6419.896 kb on - strand, within Pf6N2E2_5604 at 6419.916 kb on + strand, within Pf6N2E2_5604 at 6419.916 kb on + strand, within Pf6N2E2_5604 at 6419.970 kb on + strand, within Pf6N2E2_5604 at 6419.971 kb on - strand, within Pf6N2E2_5604 at 6419.971 kb on - strand, within Pf6N2E2_5604 at 6420.001 kb on + strand, within Pf6N2E2_5604 at 6420.097 kb on - strand, within Pf6N2E2_5604 at 6420.250 kb on - strand at 6420.323 kb on + strand at 6420.324 kb on - strand at 6420.333 kb on + strand at 6420.333 kb on + strand at 6420.333 kb on + strand at 6420.334 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.6 mM remove 6,418,646 + +0.3 6,418,646 + -0.8 6,418,646 + +0.7 6,418,646 + +0.1 6,418,647 - +0.6 6,418,647 - -0.2 6,418,688 + +0.7 6,418,688 + +0.6 6,418,688 + -1.4 6,418,688 + +1.8 6,418,688 + -0.2 6,418,689 - +1.8 6,418,689 - +0.4 6,418,689 - -0.3 6,418,689 - +0.3 6,418,689 - -1.3 6,418,689 - +1.5 6,418,691 + -0.9 6,418,692 - +0.0 6,418,707 + -0.4 6,418,707 + -1.2 6,418,707 + +0.4 6,418,708 - -0.2 6,418,708 - +0.9 6,418,708 - -0.3 6,418,709 + +0.4 6,418,709 + +1.5 6,418,709 + +0.1 6,418,709 + +0.8 6,418,709 + +0.3 6,418,709 + -0.7 6,418,709 + -1.6 6,418,710 - -0.3 6,418,710 - +0.0 6,418,710 - -0.5 6,418,710 - +0.9 6,418,710 - -0.1 6,418,710 - +0.9 6,418,919 + Pf6N2E2_5603 0.36 -0.2 6,418,919 + Pf6N2E2_5603 0.36 +0.3 6,418,919 + Pf6N2E2_5603 0.36 +0.4 6,418,920 - Pf6N2E2_5603 0.36 +0.8 6,418,920 - Pf6N2E2_5603 0.36 -0.2 6,418,920 - Pf6N2E2_5603 0.36 +0.0 6,418,920 - Pf6N2E2_5603 0.36 +0.0 6,418,920 - Pf6N2E2_5603 0.36 -1.6 6,419,228 + Pf6N2E2_5603 0.77 +0.4 6,419,228 + Pf6N2E2_5603 0.77 +0.6 6,419,228 + Pf6N2E2_5603 0.77 +0.3 6,419,229 - Pf6N2E2_5603 0.77 +1.1 6,419,376 + -1.2 6,419,376 + -1.3 6,419,383 + -0.4 6,419,383 + +0.1 6,419,383 + -1.1 6,419,384 - -0.1 6,419,384 - +0.9 6,419,384 - +0.1 6,419,384 - -1.3 6,419,384 - -1.1 6,419,496 + -1.1 6,419,497 - -0.9 6,419,497 - -0.6 6,419,540 - +0.1 6,419,564 + +0.1 6,419,565 - +1.2 6,419,565 - -1.6 6,419,617 - +1.2 6,419,826 + Pf6N2E2_5604 0.35 +0.6 6,419,886 + Pf6N2E2_5604 0.43 -0.3 6,419,886 + Pf6N2E2_5604 0.43 +1.1 6,419,889 + Pf6N2E2_5604 0.44 +0.9 6,419,889 + Pf6N2E2_5604 0.44 -0.8 6,419,889 + Pf6N2E2_5604 0.44 -0.4 6,419,890 - Pf6N2E2_5604 0.44 +0.5 6,419,896 - Pf6N2E2_5604 0.45 -1.3 6,419,896 - Pf6N2E2_5604 0.45 -2.1 6,419,916 + Pf6N2E2_5604 0.48 -0.9 6,419,916 + Pf6N2E2_5604 0.48 +0.5 6,419,970 + Pf6N2E2_5604 0.55 -1.1 6,419,971 - Pf6N2E2_5604 0.55 -0.1 6,419,971 - Pf6N2E2_5604 0.55 +0.9 6,420,001 + Pf6N2E2_5604 0.59 -0.1 6,420,097 - Pf6N2E2_5604 0.72 -0.6 6,420,250 - -0.4 6,420,323 + +0.4 6,420,324 - -0.1 6,420,333 + -2.4 6,420,333 + -0.4 6,420,333 + -0.4 6,420,334 - +1.1
Or see this region's nucleotide sequence