Experiment: Cobalt chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4181 and Pf6N2E2_4182 are separated by 33 nucleotides Pf6N2E2_4182 and Pf6N2E2_4183 are separated by 115 nucleotides Pf6N2E2_4183 and Pf6N2E2_4184 are separated by 165 nucleotides Pf6N2E2_4184 and Pf6N2E2_4185 are separated by 175 nucleotides
Pf6N2E2_4181 - Organic hydroperoxide resistance protein, at 4,866,115 to 4,866,534
_4181
Pf6N2E2_4182 - Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1), at 4,866,568 to 4,866,936
_4182
Pf6N2E2_4183 - 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100), at 4,867,052 to 4,867,840
_4183
Pf6N2E2_4184 - Glyoxalase family protein, at 4,868,006 to 4,868,359
_4184
Pf6N2E2_4185 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 4,868,535 to 4,870,091
_4185
Position (kb)
4867
4868 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4866.069 kb on + strand at 4866.102 kb on + strand at 4866.103 kb on - strand at 4866.103 kb on - strand at 4866.127 kb on + strand at 4866.127 kb on + strand at 4866.127 kb on + strand at 4866.127 kb on + strand at 4866.128 kb on - strand at 4866.274 kb on + strand, within Pf6N2E2_4181 at 4866.532 kb on + strand at 4866.532 kb on + strand at 4866.533 kb on - strand at 4866.552 kb on + strand at 4866.553 kb on - strand at 4866.651 kb on + strand, within Pf6N2E2_4182 at 4866.651 kb on + strand, within Pf6N2E2_4182 at 4866.651 kb on + strand, within Pf6N2E2_4182 at 4866.651 kb on + strand, within Pf6N2E2_4182 at 4866.651 kb on + strand, within Pf6N2E2_4182 at 4866.651 kb on + strand, within Pf6N2E2_4182 at 4866.652 kb on - strand, within Pf6N2E2_4182 at 4866.652 kb on - strand, within Pf6N2E2_4182 at 4866.652 kb on - strand, within Pf6N2E2_4182 at 4866.652 kb on - strand, within Pf6N2E2_4182 at 4866.890 kb on + strand, within Pf6N2E2_4182 at 4866.891 kb on - strand, within Pf6N2E2_4182 at 4867.005 kb on + strand at 4867.005 kb on + strand at 4867.006 kb on - strand at 4867.006 kb on - strand at 4867.006 kb on - strand at 4867.006 kb on - strand at 4867.053 kb on + strand at 4867.053 kb on + strand at 4867.131 kb on + strand, within Pf6N2E2_4183 at 4867.132 kb on - strand, within Pf6N2E2_4183 at 4867.132 kb on - strand, within Pf6N2E2_4183 at 4867.132 kb on - strand, within Pf6N2E2_4183 at 4867.132 kb on - strand, within Pf6N2E2_4183 at 4867.132 kb on - strand, within Pf6N2E2_4183 at 4867.132 kb on - strand, within Pf6N2E2_4183 at 4867.505 kb on + strand, within Pf6N2E2_4183 at 4867.505 kb on + strand, within Pf6N2E2_4183 at 4867.505 kb on + strand, within Pf6N2E2_4183 at 4867.505 kb on + strand, within Pf6N2E2_4183 at 4867.505 kb on + strand, within Pf6N2E2_4183 at 4867.505 kb on + strand, within Pf6N2E2_4183 at 4867.505 kb on + strand, within Pf6N2E2_4183 at 4867.505 kb on + strand, within Pf6N2E2_4183 at 4867.505 kb on + strand, within Pf6N2E2_4183 at 4867.505 kb on + strand, within Pf6N2E2_4183 at 4867.505 kb on + strand, within Pf6N2E2_4183 at 4867.506 kb on - strand, within Pf6N2E2_4183 at 4867.506 kb on - strand, within Pf6N2E2_4183 at 4867.506 kb on - strand, within Pf6N2E2_4183 at 4867.506 kb on - strand, within Pf6N2E2_4183 at 4867.506 kb on - strand, within Pf6N2E2_4183 at 4867.506 kb on - strand, within Pf6N2E2_4183 at 4867.506 kb on - strand, within Pf6N2E2_4183 at 4867.506 kb on - strand, within Pf6N2E2_4183 at 4867.609 kb on - strand, within Pf6N2E2_4183 at 4867.609 kb on - strand, within Pf6N2E2_4183 at 4867.609 kb on - strand, within Pf6N2E2_4183 at 4867.859 kb on - strand at 4867.880 kb on + strand at 4867.881 kb on - strand at 4867.881 kb on - strand at 4867.881 kb on - strand at 4867.897 kb on + strand at 4867.898 kb on - strand at 4867.957 kb on - strand at 4868.034 kb on + strand at 4868.050 kb on + strand, within Pf6N2E2_4184 at 4868.051 kb on - strand, within Pf6N2E2_4184 at 4868.151 kb on + strand, within Pf6N2E2_4184 at 4868.151 kb on + strand, within Pf6N2E2_4184 at 4868.151 kb on + strand, within Pf6N2E2_4184 at 4868.151 kb on + strand, within Pf6N2E2_4184 at 4868.152 kb on - strand, within Pf6N2E2_4184 at 4868.152 kb on - strand, within Pf6N2E2_4184 at 4868.152 kb on - strand, within Pf6N2E2_4184 at 4868.152 kb on - strand, within Pf6N2E2_4184 at 4868.152 kb on - strand, within Pf6N2E2_4184 at 4868.235 kb on + strand, within Pf6N2E2_4184 at 4868.235 kb on + strand, within Pf6N2E2_4184 at 4868.235 kb on + strand, within Pf6N2E2_4184 at 4868.236 kb on - strand, within Pf6N2E2_4184 at 4868.236 kb on - strand, within Pf6N2E2_4184 at 4868.236 kb on - strand, within Pf6N2E2_4184 at 4868.236 kb on - strand, within Pf6N2E2_4184 at 4868.236 kb on - strand, within Pf6N2E2_4184 at 4868.236 kb on - strand, within Pf6N2E2_4184 at 4868.247 kb on + strand, within Pf6N2E2_4184 at 4868.280 kb on + strand, within Pf6N2E2_4184 at 4868.280 kb on + strand, within Pf6N2E2_4184 at 4868.280 kb on + strand, within Pf6N2E2_4184 at 4868.280 kb on + strand, within Pf6N2E2_4184 at 4868.280 kb on + strand, within Pf6N2E2_4184 at 4868.280 kb on + strand, within Pf6N2E2_4184 at 4868.280 kb on + strand, within Pf6N2E2_4184 at 4868.280 kb on + strand, within Pf6N2E2_4184 at 4868.280 kb on + strand, within Pf6N2E2_4184 at 4868.280 kb on + strand, within Pf6N2E2_4184 at 4868.280 kb on + strand, within Pf6N2E2_4184 at 4868.281 kb on - strand, within Pf6N2E2_4184 at 4868.281 kb on - strand, within Pf6N2E2_4184 at 4868.281 kb on - strand, within Pf6N2E2_4184 at 4868.281 kb on - strand, within Pf6N2E2_4184 at 4868.281 kb on - strand, within Pf6N2E2_4184 at 4868.281 kb on - strand, within Pf6N2E2_4184 at 4868.281 kb on - strand, within Pf6N2E2_4184 at 4868.281 kb on - strand, within Pf6N2E2_4184 at 4868.281 kb on - strand, within Pf6N2E2_4184 at 4868.281 kb on - strand, within Pf6N2E2_4184 at 4868.281 kb on - strand, within Pf6N2E2_4184 at 4868.281 kb on - strand, within Pf6N2E2_4184 at 4868.344 kb on + strand at 4868.345 kb on - strand at 4868.386 kb on + strand at 4868.386 kb on + strand at 4868.397 kb on - strand at 4868.397 kb on - strand at 4868.467 kb on + strand at 4868.467 kb on + strand at 4868.467 kb on + strand at 4868.467 kb on + strand at 4868.467 kb on + strand at 4868.467 kb on + strand at 4868.467 kb on + strand at 4868.467 kb on + strand at 4868.467 kb on + strand at 4868.467 kb on + strand at 4868.467 kb on + strand at 4868.467 kb on + strand at 4868.467 kb on + strand at 4868.468 kb on - strand at 4868.468 kb on - strand at 4868.468 kb on - strand at 4868.468 kb on - strand at 4868.468 kb on - strand at 4868.468 kb on - strand at 4868.468 kb on - strand at 4868.468 kb on - strand at 4868.468 kb on - strand at 4868.468 kb on - strand at 4868.489 kb on + strand at 4868.489 kb on + strand at 4868.499 kb on + strand at 4868.499 kb on + strand at 4868.500 kb on - strand at 4868.536 kb on + strand at 4868.537 kb on - strand at 4868.537 kb on - strand at 4868.537 kb on - strand at 4868.537 kb on - strand at 4868.543 kb on + strand at 4868.543 kb on + strand at 4868.544 kb on - strand at 4868.553 kb on + strand at 4868.553 kb on + strand at 4868.554 kb on - strand at 4868.554 kb on - strand at 4868.742 kb on + strand, within Pf6N2E2_4185 at 4868.742 kb on + strand, within Pf6N2E2_4185 at 4868.742 kb on + strand, within Pf6N2E2_4185 at 4868.747 kb on + strand, within Pf6N2E2_4185 at 4868.747 kb on + strand, within Pf6N2E2_4185 at 4868.748 kb on - strand, within Pf6N2E2_4185 at 4868.748 kb on - strand, within Pf6N2E2_4185 at 4868.748 kb on - strand, within Pf6N2E2_4185
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.6 mM remove 4,866,069 + -0.4 4,866,102 + -0.6 4,866,103 - +0.0 4,866,103 - +0.4 4,866,127 + -1.0 4,866,127 + -1.2 4,866,127 + +0.2 4,866,127 + -0.4 4,866,128 - +0.4 4,866,274 + Pf6N2E2_4181 0.38 -0.4 4,866,532 + +0.7 4,866,532 + +0.6 4,866,533 - +1.4 4,866,552 + -0.9 4,866,553 - -0.8 4,866,651 + Pf6N2E2_4182 0.22 +0.5 4,866,651 + Pf6N2E2_4182 0.22 +0.2 4,866,651 + Pf6N2E2_4182 0.22 +0.2 4,866,651 + Pf6N2E2_4182 0.22 -0.6 4,866,651 + Pf6N2E2_4182 0.22 +0.2 4,866,651 + Pf6N2E2_4182 0.22 +0.2 4,866,652 - Pf6N2E2_4182 0.23 -0.5 4,866,652 - Pf6N2E2_4182 0.23 -0.1 4,866,652 - Pf6N2E2_4182 0.23 +0.4 4,866,652 - Pf6N2E2_4182 0.23 -1.1 4,866,890 + Pf6N2E2_4182 0.87 +1.1 4,866,891 - Pf6N2E2_4182 0.88 -1.2 4,867,005 + -0.2 4,867,005 + +0.1 4,867,006 - -0.1 4,867,006 - +0.6 4,867,006 - +0.5 4,867,006 - +0.2 4,867,053 + -1.3 4,867,053 + -0.0 4,867,131 + Pf6N2E2_4183 0.10 -0.2 4,867,132 - Pf6N2E2_4183 0.10 -0.7 4,867,132 - Pf6N2E2_4183 0.10 +0.9 4,867,132 - Pf6N2E2_4183 0.10 +0.4 4,867,132 - Pf6N2E2_4183 0.10 -0.6 4,867,132 - Pf6N2E2_4183 0.10 +0.6 4,867,132 - Pf6N2E2_4183 0.10 -1.8 4,867,505 + Pf6N2E2_4183 0.57 -0.2 4,867,505 + Pf6N2E2_4183 0.57 -0.6 4,867,505 + Pf6N2E2_4183 0.57 +0.6 4,867,505 + Pf6N2E2_4183 0.57 +0.0 4,867,505 + Pf6N2E2_4183 0.57 -0.3 4,867,505 + Pf6N2E2_4183 0.57 +0.8 4,867,505 + Pf6N2E2_4183 0.57 +2.0 4,867,505 + Pf6N2E2_4183 0.57 +0.3 4,867,505 + Pf6N2E2_4183 0.57 -0.8 4,867,505 + Pf6N2E2_4183 0.57 +1.1 4,867,505 + Pf6N2E2_4183 0.57 +0.2 4,867,506 - Pf6N2E2_4183 0.58 +0.3 4,867,506 - Pf6N2E2_4183 0.58 -1.9 4,867,506 - Pf6N2E2_4183 0.58 +0.3 4,867,506 - Pf6N2E2_4183 0.58 +0.7 4,867,506 - Pf6N2E2_4183 0.58 -0.3 4,867,506 - Pf6N2E2_4183 0.58 +0.5 4,867,506 - Pf6N2E2_4183 0.58 -0.1 4,867,506 - Pf6N2E2_4183 0.58 -0.8 4,867,609 - Pf6N2E2_4183 0.71 +0.1 4,867,609 - Pf6N2E2_4183 0.71 +0.9 4,867,609 - Pf6N2E2_4183 0.71 +1.0 4,867,859 - -0.8 4,867,880 + -0.4 4,867,881 - +0.3 4,867,881 - -0.4 4,867,881 - +0.8 4,867,897 + +0.5 4,867,898 - +0.8 4,867,957 - +2.0 4,868,034 + -0.4 4,868,050 + Pf6N2E2_4184 0.12 -0.5 4,868,051 - Pf6N2E2_4184 0.13 +0.1 4,868,151 + Pf6N2E2_4184 0.41 -1.0 4,868,151 + Pf6N2E2_4184 0.41 +1.4 4,868,151 + Pf6N2E2_4184 0.41 -0.2 4,868,151 + Pf6N2E2_4184 0.41 -0.1 4,868,152 - Pf6N2E2_4184 0.41 -0.9 4,868,152 - Pf6N2E2_4184 0.41 +1.4 4,868,152 - Pf6N2E2_4184 0.41 +0.4 4,868,152 - Pf6N2E2_4184 0.41 -1.5 4,868,152 - Pf6N2E2_4184 0.41 -1.9 4,868,235 + Pf6N2E2_4184 0.65 -0.6 4,868,235 + Pf6N2E2_4184 0.65 -1.4 4,868,235 + Pf6N2E2_4184 0.65 +0.7 4,868,236 - Pf6N2E2_4184 0.65 -0.7 4,868,236 - Pf6N2E2_4184 0.65 -0.7 4,868,236 - Pf6N2E2_4184 0.65 +1.4 4,868,236 - Pf6N2E2_4184 0.65 +0.2 4,868,236 - Pf6N2E2_4184 0.65 -0.2 4,868,236 - Pf6N2E2_4184 0.65 +0.1 4,868,247 + Pf6N2E2_4184 0.68 +0.5 4,868,280 + Pf6N2E2_4184 0.77 +0.0 4,868,280 + Pf6N2E2_4184 0.77 -0.1 4,868,280 + Pf6N2E2_4184 0.77 +0.5 4,868,280 + Pf6N2E2_4184 0.77 -0.5 4,868,280 + Pf6N2E2_4184 0.77 -0.5 4,868,280 + Pf6N2E2_4184 0.77 +0.6 4,868,280 + Pf6N2E2_4184 0.77 +0.1 4,868,280 + Pf6N2E2_4184 0.77 +0.0 4,868,280 + Pf6N2E2_4184 0.77 +1.4 4,868,280 + Pf6N2E2_4184 0.77 -0.2 4,868,280 + Pf6N2E2_4184 0.77 -0.1 4,868,281 - Pf6N2E2_4184 0.78 +0.6 4,868,281 - Pf6N2E2_4184 0.78 +0.4 4,868,281 - Pf6N2E2_4184 0.78 -1.0 4,868,281 - Pf6N2E2_4184 0.78 +0.4 4,868,281 - Pf6N2E2_4184 0.78 +0.3 4,868,281 - Pf6N2E2_4184 0.78 +0.9 4,868,281 - Pf6N2E2_4184 0.78 +0.4 4,868,281 - Pf6N2E2_4184 0.78 +0.2 4,868,281 - Pf6N2E2_4184 0.78 -0.7 4,868,281 - Pf6N2E2_4184 0.78 -0.3 4,868,281 - Pf6N2E2_4184 0.78 +0.4 4,868,281 - Pf6N2E2_4184 0.78 +0.2 4,868,344 + +1.4 4,868,345 - +0.6 4,868,386 + -0.5 4,868,386 + -1.1 4,868,397 - -1.0 4,868,397 - -1.3 4,868,467 + -0.5 4,868,467 + +0.4 4,868,467 + +0.5 4,868,467 + -1.4 4,868,467 + -0.1 4,868,467 + +0.2 4,868,467 + -0.3 4,868,467 + -0.9 4,868,467 + -0.0 4,868,467 + -1.3 4,868,467 + -0.7 4,868,467 + +0.0 4,868,467 + +0.5 4,868,468 - +0.5 4,868,468 - +1.8 4,868,468 - +0.6 4,868,468 - +0.2 4,868,468 - -0.1 4,868,468 - +0.5 4,868,468 - +0.2 4,868,468 - -0.2 4,868,468 - +1.7 4,868,468 - -0.7 4,868,489 + +0.6 4,868,489 + -0.6 4,868,499 + -0.3 4,868,499 + -0.5 4,868,500 - +0.0 4,868,536 + +0.2 4,868,537 - +1.1 4,868,537 - +0.3 4,868,537 - -0.4 4,868,537 - +0.3 4,868,543 + +0.4 4,868,543 + +2.4 4,868,544 - -0.5 4,868,553 + -0.0 4,868,553 + +0.6 4,868,554 - +1.6 4,868,554 - -0.5 4,868,742 + Pf6N2E2_4185 0.13 +0.4 4,868,742 + Pf6N2E2_4185 0.13 -0.8 4,868,742 + Pf6N2E2_4185 0.13 -0.2 4,868,747 + Pf6N2E2_4185 0.14 -0.2 4,868,747 + Pf6N2E2_4185 0.14 +0.7 4,868,748 - Pf6N2E2_4185 0.14 -1.8 4,868,748 - Pf6N2E2_4185 0.14 +0.1 4,868,748 - Pf6N2E2_4185 0.14 -1.6
Or see this region's nucleotide sequence