Experiment: Cobalt chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3510 and Pf6N2E2_3511 are separated by 47 nucleotides Pf6N2E2_3511 and Pf6N2E2_3512 are separated by 17 nucleotides Pf6N2E2_3512 and Pf6N2E2_3513 are separated by 81 nucleotides
Pf6N2E2_3510 - 3-dehydroquinate dehydratase II (EC 4.2.1.10), at 4,092,370 to 4,092,822
_3510
Pf6N2E2_3511 - Biotin carboxyl carrier protein of acetyl-CoA carboxylase, at 4,092,870 to 4,093,334
_3511
Pf6N2E2_3512 - Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14), at 4,093,352 to 4,094,707
_3512
Pf6N2E2_3513 - hypothetical protein, at 4,094,789 to 4,098,757
_3513
Position (kb)
4093
4094
4095 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4092.354 kb on + strand at 4092.791 kb on + strand at 4094.848 kb on + strand at 4094.875 kb on - strand at 4094.875 kb on - strand at 4094.975 kb on + strand at 4094.976 kb on - strand at 4094.976 kb on - strand at 4094.976 kb on - strand at 4094.976 kb on - strand at 4094.976 kb on - strand at 4094.979 kb on + strand at 4094.979 kb on + strand at 4094.979 kb on + strand at 4094.979 kb on + strand at 4094.979 kb on + strand at 4094.979 kb on + strand at 4094.980 kb on - strand at 4094.980 kb on - strand at 4094.980 kb on - strand at 4094.980 kb on - strand at 4094.980 kb on - strand at 4094.980 kb on - strand at 4094.980 kb on - strand at 4094.980 kb on - strand at 4095.022 kb on + strand at 4095.022 kb on + strand at 4095.023 kb on - strand at 4095.023 kb on - strand at 4095.023 kb on - strand at 4095.023 kb on - strand at 4095.023 kb on - strand at 4095.035 kb on + strand at 4095.035 kb on + strand at 4095.035 kb on + strand at 4095.035 kb on + strand at 4095.035 kb on + strand at 4095.035 kb on + strand at 4095.035 kb on + strand at 4095.035 kb on + strand at 4095.035 kb on + strand at 4095.035 kb on + strand at 4095.036 kb on - strand at 4095.036 kb on - strand at 4095.036 kb on - strand at 4095.036 kb on - strand at 4095.036 kb on - strand at 4095.036 kb on - strand at 4095.036 kb on - strand at 4095.036 kb on - strand at 4095.036 kb on - strand at 4095.036 kb on - strand at 4095.036 kb on - strand at 4095.036 kb on - strand at 4095.036 kb on - strand at 4095.036 kb on - strand at 4095.036 kb on - strand at 4095.036 kb on - strand at 4095.036 kb on - strand at 4095.036 kb on - strand at 4095.036 kb on - strand at 4095.058 kb on + strand at 4095.078 kb on + strand at 4095.078 kb on + strand at 4095.079 kb on - strand at 4095.079 kb on - strand at 4095.079 kb on - strand at 4095.079 kb on - strand at 4095.191 kb on - strand, within Pf6N2E2_3513 at 4095.303 kb on + strand, within Pf6N2E2_3513 at 4095.303 kb on + strand, within Pf6N2E2_3513 at 4095.303 kb on + strand, within Pf6N2E2_3513 at 4095.304 kb on - strand, within Pf6N2E2_3513 at 4095.304 kb on - strand, within Pf6N2E2_3513 at 4095.348 kb on + strand, within Pf6N2E2_3513 at 4095.348 kb on + strand, within Pf6N2E2_3513 at 4095.348 kb on + strand, within Pf6N2E2_3513 at 4095.348 kb on + strand, within Pf6N2E2_3513 at 4095.348 kb on + strand, within Pf6N2E2_3513 at 4095.349 kb on - strand, within Pf6N2E2_3513 at 4095.349 kb on - strand, within Pf6N2E2_3513 at 4095.349 kb on - strand, within Pf6N2E2_3513 at 4095.349 kb on - strand, within Pf6N2E2_3513 at 4095.413 kb on + strand, within Pf6N2E2_3513 at 4095.413 kb on + strand, within Pf6N2E2_3513 at 4095.413 kb on + strand, within Pf6N2E2_3513 at 4095.414 kb on - strand, within Pf6N2E2_3513 at 4095.414 kb on - strand, within Pf6N2E2_3513 at 4095.414 kb on - strand, within Pf6N2E2_3513 at 4095.414 kb on - strand, within Pf6N2E2_3513 at 4095.414 kb on - strand, within Pf6N2E2_3513 at 4095.414 kb on - strand, within Pf6N2E2_3513 at 4095.414 kb on - strand, within Pf6N2E2_3513 at 4095.476 kb on + strand, within Pf6N2E2_3513 at 4095.476 kb on + strand, within Pf6N2E2_3513 at 4095.476 kb on + strand, within Pf6N2E2_3513 at 4095.476 kb on + strand, within Pf6N2E2_3513 at 4095.476 kb on + strand, within Pf6N2E2_3513 at 4095.476 kb on + strand, within Pf6N2E2_3513 at 4095.476 kb on + strand, within Pf6N2E2_3513 at 4095.476 kb on + strand, within Pf6N2E2_3513 at 4095.477 kb on - strand, within Pf6N2E2_3513 at 4095.477 kb on - strand, within Pf6N2E2_3513 at 4095.477 kb on - strand, within Pf6N2E2_3513 at 4095.477 kb on - strand, within Pf6N2E2_3513 at 4095.477 kb on - strand, within Pf6N2E2_3513 at 4095.477 kb on - strand, within Pf6N2E2_3513 at 4095.477 kb on - strand, within Pf6N2E2_3513 at 4095.477 kb on - strand, within Pf6N2E2_3513 at 4095.477 kb on - strand, within Pf6N2E2_3513 at 4095.477 kb on - strand, within Pf6N2E2_3513 at 4095.477 kb on - strand, within Pf6N2E2_3513 at 4095.555 kb on + strand, within Pf6N2E2_3513 at 4095.555 kb on + strand, within Pf6N2E2_3513 at 4095.555 kb on + strand, within Pf6N2E2_3513 at 4095.555 kb on + strand, within Pf6N2E2_3513 at 4095.556 kb on - strand, within Pf6N2E2_3513 at 4095.556 kb on - strand, within Pf6N2E2_3513 at 4095.556 kb on - strand, within Pf6N2E2_3513 at 4095.556 kb on - strand, within Pf6N2E2_3513 at 4095.556 kb on - strand, within Pf6N2E2_3513 at 4095.556 kb on - strand, within Pf6N2E2_3513 at 4095.556 kb on - strand, within Pf6N2E2_3513 at 4095.556 kb on - strand, within Pf6N2E2_3513 at 4095.624 kb on + strand, within Pf6N2E2_3513 at 4095.624 kb on + strand, within Pf6N2E2_3513 at 4095.625 kb on - strand, within Pf6N2E2_3513 at 4095.627 kb on + strand, within Pf6N2E2_3513 at 4095.627 kb on + strand, within Pf6N2E2_3513 at 4095.627 kb on + strand, within Pf6N2E2_3513 at 4095.627 kb on + strand, within Pf6N2E2_3513 at 4095.628 kb on - strand, within Pf6N2E2_3513 at 4095.628 kb on - strand, within Pf6N2E2_3513 at 4095.628 kb on - strand, within Pf6N2E2_3513 at 4095.628 kb on - strand, within Pf6N2E2_3513 at 4095.628 kb on - strand, within Pf6N2E2_3513 at 4095.628 kb on - strand, within Pf6N2E2_3513 at 4095.638 kb on - strand, within Pf6N2E2_3513 at 4095.648 kb on + strand, within Pf6N2E2_3513 at 4095.648 kb on + strand, within Pf6N2E2_3513 at 4095.648 kb on + strand, within Pf6N2E2_3513 at 4095.648 kb on + strand, within Pf6N2E2_3513 at 4095.648 kb on + strand, within Pf6N2E2_3513 at 4095.648 kb on + strand, within Pf6N2E2_3513 at 4095.649 kb on - strand, within Pf6N2E2_3513 at 4095.649 kb on - strand, within Pf6N2E2_3513 at 4095.649 kb on - strand, within Pf6N2E2_3513 at 4095.649 kb on - strand, within Pf6N2E2_3513 at 4095.649 kb on - strand, within Pf6N2E2_3513 at 4095.651 kb on + strand, within Pf6N2E2_3513 at 4095.651 kb on + strand, within Pf6N2E2_3513 at 4095.651 kb on + strand, within Pf6N2E2_3513 at 4095.651 kb on + strand, within Pf6N2E2_3513 at 4095.651 kb on + strand, within Pf6N2E2_3513 at 4095.651 kb on + strand, within Pf6N2E2_3513 at 4095.651 kb on + strand, within Pf6N2E2_3513 at 4095.652 kb on - strand, within Pf6N2E2_3513 at 4095.652 kb on - strand, within Pf6N2E2_3513 at 4095.652 kb on - strand, within Pf6N2E2_3513 at 4095.652 kb on - strand, within Pf6N2E2_3513 at 4095.652 kb on - strand, within Pf6N2E2_3513 at 4095.652 kb on - strand, within Pf6N2E2_3513 at 4095.652 kb on - strand, within Pf6N2E2_3513 at 4095.652 kb on - strand, within Pf6N2E2_3513 at 4095.655 kb on + strand, within Pf6N2E2_3513 at 4095.655 kb on + strand, within Pf6N2E2_3513 at 4095.655 kb on + strand, within Pf6N2E2_3513 at 4095.655 kb on + strand, within Pf6N2E2_3513 at 4095.655 kb on + strand, within Pf6N2E2_3513 at 4095.656 kb on - strand, within Pf6N2E2_3513 at 4095.656 kb on - strand, within Pf6N2E2_3513 at 4095.656 kb on - strand, within Pf6N2E2_3513 at 4095.656 kb on - strand, within Pf6N2E2_3513 at 4095.656 kb on - strand, within Pf6N2E2_3513 at 4095.656 kb on - strand, within Pf6N2E2_3513 at 4095.656 kb on - strand, within Pf6N2E2_3513 at 4095.690 kb on + strand, within Pf6N2E2_3513 at 4095.690 kb on + strand, within Pf6N2E2_3513 at 4095.691 kb on - strand, within Pf6N2E2_3513 at 4095.691 kb on - strand, within Pf6N2E2_3513 at 4095.691 kb on - strand, within Pf6N2E2_3513 at 4095.691 kb on - strand, within Pf6N2E2_3513 at 4095.706 kb on + strand, within Pf6N2E2_3513 at 4095.707 kb on - strand, within Pf6N2E2_3513 at 4095.707 kb on - strand, within Pf6N2E2_3513 at 4095.707 kb on - strand, within Pf6N2E2_3513
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.6 mM remove 4,092,354 + -1.6 4,092,791 + -0.9 4,094,848 + -1.0 4,094,875 - -0.9 4,094,875 - -2.0 4,094,975 + -0.3 4,094,976 - +0.5 4,094,976 - +0.6 4,094,976 - +0.2 4,094,976 - -0.2 4,094,976 - +0.1 4,094,979 + -0.5 4,094,979 + -0.1 4,094,979 + +0.4 4,094,979 + -0.6 4,094,979 + +0.1 4,094,979 + -1.2 4,094,980 - +0.6 4,094,980 - +0.3 4,094,980 - +0.5 4,094,980 - -0.1 4,094,980 - -0.3 4,094,980 - +0.0 4,094,980 - -0.0 4,094,980 - +0.8 4,095,022 + +1.3 4,095,022 + +0.8 4,095,023 - +0.4 4,095,023 - -0.0 4,095,023 - -1.2 4,095,023 - +0.5 4,095,023 - +0.6 4,095,035 + +1.1 4,095,035 + +1.1 4,095,035 + -1.4 4,095,035 + +0.1 4,095,035 + +0.6 4,095,035 + +2.7 4,095,035 + +0.1 4,095,035 + +1.7 4,095,035 + -0.0 4,095,035 + +0.3 4,095,036 - +0.9 4,095,036 - -0.5 4,095,036 - +1.0 4,095,036 - -0.9 4,095,036 - +0.5 4,095,036 - +0.4 4,095,036 - -0.9 4,095,036 - -1.1 4,095,036 - +1.5 4,095,036 - +1.0 4,095,036 - -0.1 4,095,036 - -0.2 4,095,036 - +0.5 4,095,036 - +0.0 4,095,036 - +1.2 4,095,036 - +0.6 4,095,036 - -0.1 4,095,036 - -1.1 4,095,036 - +0.1 4,095,058 + +0.1 4,095,078 + -0.2 4,095,078 + -0.5 4,095,079 - -0.1 4,095,079 - -0.0 4,095,079 - +0.1 4,095,079 - +0.6 4,095,191 - Pf6N2E2_3513 0.10 -0.5 4,095,303 + Pf6N2E2_3513 0.13 -0.9 4,095,303 + Pf6N2E2_3513 0.13 -0.4 4,095,303 + Pf6N2E2_3513 0.13 -0.6 4,095,304 - Pf6N2E2_3513 0.13 +0.3 4,095,304 - Pf6N2E2_3513 0.13 -1.5 4,095,348 + Pf6N2E2_3513 0.14 -0.2 4,095,348 + Pf6N2E2_3513 0.14 +0.8 4,095,348 + Pf6N2E2_3513 0.14 +0.0 4,095,348 + Pf6N2E2_3513 0.14 -0.4 4,095,348 + Pf6N2E2_3513 0.14 -0.4 4,095,349 - Pf6N2E2_3513 0.14 -0.3 4,095,349 - Pf6N2E2_3513 0.14 -0.0 4,095,349 - Pf6N2E2_3513 0.14 +0.8 4,095,349 - Pf6N2E2_3513 0.14 -0.2 4,095,413 + Pf6N2E2_3513 0.16 +0.2 4,095,413 + Pf6N2E2_3513 0.16 -1.4 4,095,413 + Pf6N2E2_3513 0.16 +1.1 4,095,414 - Pf6N2E2_3513 0.16 -0.2 4,095,414 - Pf6N2E2_3513 0.16 +0.7 4,095,414 - Pf6N2E2_3513 0.16 +1.1 4,095,414 - Pf6N2E2_3513 0.16 +0.7 4,095,414 - Pf6N2E2_3513 0.16 +0.8 4,095,414 - Pf6N2E2_3513 0.16 +0.5 4,095,414 - Pf6N2E2_3513 0.16 -0.7 4,095,476 + Pf6N2E2_3513 0.17 -2.2 4,095,476 + Pf6N2E2_3513 0.17 +0.5 4,095,476 + Pf6N2E2_3513 0.17 +1.2 4,095,476 + Pf6N2E2_3513 0.17 +1.1 4,095,476 + Pf6N2E2_3513 0.17 +0.8 4,095,476 + Pf6N2E2_3513 0.17 -0.1 4,095,476 + Pf6N2E2_3513 0.17 -3.0 4,095,476 + Pf6N2E2_3513 0.17 -0.2 4,095,477 - Pf6N2E2_3513 0.17 -0.0 4,095,477 - Pf6N2E2_3513 0.17 -0.2 4,095,477 - Pf6N2E2_3513 0.17 -0.1 4,095,477 - Pf6N2E2_3513 0.17 -1.2 4,095,477 - Pf6N2E2_3513 0.17 -0.1 4,095,477 - Pf6N2E2_3513 0.17 +0.8 4,095,477 - Pf6N2E2_3513 0.17 -0.0 4,095,477 - Pf6N2E2_3513 0.17 +0.3 4,095,477 - Pf6N2E2_3513 0.17 -0.5 4,095,477 - Pf6N2E2_3513 0.17 -1.4 4,095,477 - Pf6N2E2_3513 0.17 +2.3 4,095,555 + Pf6N2E2_3513 0.19 +0.1 4,095,555 + Pf6N2E2_3513 0.19 -0.5 4,095,555 + Pf6N2E2_3513 0.19 +0.9 4,095,555 + Pf6N2E2_3513 0.19 -0.9 4,095,556 - Pf6N2E2_3513 0.19 -0.6 4,095,556 - Pf6N2E2_3513 0.19 +0.1 4,095,556 - Pf6N2E2_3513 0.19 -0.1 4,095,556 - Pf6N2E2_3513 0.19 +0.8 4,095,556 - Pf6N2E2_3513 0.19 +0.4 4,095,556 - Pf6N2E2_3513 0.19 +0.1 4,095,556 - Pf6N2E2_3513 0.19 -0.7 4,095,556 - Pf6N2E2_3513 0.19 -0.5 4,095,624 + Pf6N2E2_3513 0.21 -0.9 4,095,624 + Pf6N2E2_3513 0.21 +0.7 4,095,625 - Pf6N2E2_3513 0.21 +1.1 4,095,627 + Pf6N2E2_3513 0.21 -0.4 4,095,627 + Pf6N2E2_3513 0.21 -0.4 4,095,627 + Pf6N2E2_3513 0.21 +0.9 4,095,627 + Pf6N2E2_3513 0.21 +0.2 4,095,628 - Pf6N2E2_3513 0.21 -1.5 4,095,628 - Pf6N2E2_3513 0.21 -0.2 4,095,628 - Pf6N2E2_3513 0.21 -0.1 4,095,628 - Pf6N2E2_3513 0.21 +0.2 4,095,628 - Pf6N2E2_3513 0.21 -0.1 4,095,628 - Pf6N2E2_3513 0.21 -0.8 4,095,638 - Pf6N2E2_3513 0.21 +0.9 4,095,648 + Pf6N2E2_3513 0.22 +0.2 4,095,648 + Pf6N2E2_3513 0.22 +0.4 4,095,648 + Pf6N2E2_3513 0.22 +0.4 4,095,648 + Pf6N2E2_3513 0.22 +0.8 4,095,648 + Pf6N2E2_3513 0.22 -0.4 4,095,648 + Pf6N2E2_3513 0.22 -0.7 4,095,649 - Pf6N2E2_3513 0.22 +1.1 4,095,649 - Pf6N2E2_3513 0.22 +0.1 4,095,649 - Pf6N2E2_3513 0.22 -1.0 4,095,649 - Pf6N2E2_3513 0.22 +1.7 4,095,649 - Pf6N2E2_3513 0.22 -0.3 4,095,651 + Pf6N2E2_3513 0.22 +1.0 4,095,651 + Pf6N2E2_3513 0.22 +0.8 4,095,651 + Pf6N2E2_3513 0.22 +0.6 4,095,651 + Pf6N2E2_3513 0.22 -0.7 4,095,651 + Pf6N2E2_3513 0.22 -0.6 4,095,651 + Pf6N2E2_3513 0.22 -0.8 4,095,651 + Pf6N2E2_3513 0.22 -0.0 4,095,652 - Pf6N2E2_3513 0.22 +0.1 4,095,652 - Pf6N2E2_3513 0.22 -0.3 4,095,652 - Pf6N2E2_3513 0.22 +0.2 4,095,652 - Pf6N2E2_3513 0.22 -0.1 4,095,652 - Pf6N2E2_3513 0.22 +1.1 4,095,652 - Pf6N2E2_3513 0.22 +0.8 4,095,652 - Pf6N2E2_3513 0.22 +0.0 4,095,652 - Pf6N2E2_3513 0.22 +0.9 4,095,655 + Pf6N2E2_3513 0.22 +0.1 4,095,655 + Pf6N2E2_3513 0.22 +0.1 4,095,655 + Pf6N2E2_3513 0.22 +0.3 4,095,655 + Pf6N2E2_3513 0.22 -0.7 4,095,655 + Pf6N2E2_3513 0.22 -1.4 4,095,656 - Pf6N2E2_3513 0.22 +0.9 4,095,656 - Pf6N2E2_3513 0.22 -1.0 4,095,656 - Pf6N2E2_3513 0.22 +0.2 4,095,656 - Pf6N2E2_3513 0.22 +0.4 4,095,656 - Pf6N2E2_3513 0.22 +0.4 4,095,656 - Pf6N2E2_3513 0.22 -0.5 4,095,656 - Pf6N2E2_3513 0.22 +0.1 4,095,690 + Pf6N2E2_3513 0.23 +0.8 4,095,690 + Pf6N2E2_3513 0.23 -1.3 4,095,691 - Pf6N2E2_3513 0.23 -0.9 4,095,691 - Pf6N2E2_3513 0.23 +0.5 4,095,691 - Pf6N2E2_3513 0.23 -1.1 4,095,691 - Pf6N2E2_3513 0.23 +0.2 4,095,706 + Pf6N2E2_3513 0.23 -1.1 4,095,707 - Pf6N2E2_3513 0.23 -0.5 4,095,707 - Pf6N2E2_3513 0.23 +1.1 4,095,707 - Pf6N2E2_3513 0.23 +0.2
Or see this region's nucleotide sequence