Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3058

Experiment: Cobalt chloride 0.6 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPf6N2E2_3056 and Pf6N2E2_3057 are separated by 2 nucleotidesPf6N2E2_3057 and Pf6N2E2_3058 overlap by 4 nucleotidesPf6N2E2_3058 and Pf6N2E2_3059 are separated by 105 nucleotides Pf6N2E2_3056 - Lipid-A-disaccharide synthase (EC 2.4.1.182), at 3,542,235 to 3,543,365 _3056 Pf6N2E2_3057 - Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase (EC 2.3.1.129), at 3,543,368 to 3,544,144 _3057 Pf6N2E2_3058 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC 4.2.1.59), at 3,544,141 to 3,544,581 _3058 Pf6N2E2_3059 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.191), at 3,544,687 to 3,545,742 _3059 Position (kb) 3544 3545Strain fitness (log2 ratio) -1 0 1at 3544.601 kb on - strandat 3544.655 kb on - strandat 3544.686 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Cobalt chloride 0.6 mM
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3,544,601 - -0.5
3,544,655 - -0.7
3,544,686 - -0.1

Or see this region's nucleotide sequence