Experiment: Cobalt chloride 0.4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4112 and Pf6N2E2_4113 are separated by 86 nucleotides Pf6N2E2_4113 and Pf6N2E2_4114 are separated by 122 nucleotides
Pf6N2E2_4112 - NADPH:quinone oxidoreductase 2, at 4,790,694 to 4,791,533
_4112
Pf6N2E2_4113 - Redox-sensing transcriptional regulator QorR, at 4,791,620 to 4,792,030
_4113
Pf6N2E2_4114 - hypothetical protein, at 4,792,153 to 4,792,368
_4114
Position (kb)
4792
4793 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4791.232 kb on + strand, within Pf6N2E2_4112 at 4791.232 kb on + strand, within Pf6N2E2_4112 at 4791.232 kb on + strand, within Pf6N2E2_4112 at 4791.232 kb on + strand, within Pf6N2E2_4112 at 4791.233 kb on - strand, within Pf6N2E2_4112 at 4791.233 kb on - strand, within Pf6N2E2_4112 at 4791.233 kb on - strand, within Pf6N2E2_4112 at 4791.332 kb on + strand, within Pf6N2E2_4112 at 4791.376 kb on + strand, within Pf6N2E2_4112 at 4791.377 kb on - strand, within Pf6N2E2_4112 at 4791.540 kb on + strand at 4791.540 kb on + strand at 4791.540 kb on + strand at 4791.540 kb on + strand at 4791.540 kb on + strand at 4791.540 kb on + strand at 4791.540 kb on + strand at 4791.540 kb on + strand at 4791.540 kb on + strand at 4791.541 kb on - strand at 4791.541 kb on - strand at 4791.541 kb on - strand at 4791.541 kb on - strand at 4791.541 kb on - strand at 4791.572 kb on + strand at 4791.572 kb on + strand at 4791.572 kb on + strand at 4791.572 kb on + strand at 4791.572 kb on + strand at 4791.572 kb on + strand at 4791.573 kb on - strand at 4791.580 kb on + strand at 4791.599 kb on - strand at 4791.599 kb on - strand at 4791.606 kb on + strand at 4791.607 kb on - strand at 4791.613 kb on - strand at 4791.613 kb on - strand at 4791.616 kb on + strand at 4791.616 kb on + strand at 4791.902 kb on + strand, within Pf6N2E2_4113 at 4791.903 kb on - strand, within Pf6N2E2_4113 at 4791.903 kb on - strand, within Pf6N2E2_4113 at 4791.985 kb on + strand, within Pf6N2E2_4113 at 4792.066 kb on + strand at 4792.066 kb on + strand at 4792.067 kb on - strand at 4792.067 kb on - strand at 4792.115 kb on + strand at 4792.116 kb on - strand at 4792.119 kb on + strand at 4792.119 kb on + strand at 4792.119 kb on + strand at 4792.230 kb on + strand, within Pf6N2E2_4114 at 4792.285 kb on + strand, within Pf6N2E2_4114 at 4792.285 kb on + strand, within Pf6N2E2_4114 at 4792.285 kb on + strand, within Pf6N2E2_4114 at 4792.286 kb on - strand, within Pf6N2E2_4114 at 4792.286 kb on - strand, within Pf6N2E2_4114 at 4792.306 kb on + strand, within Pf6N2E2_4114 at 4792.306 kb on + strand, within Pf6N2E2_4114 at 4792.307 kb on - strand, within Pf6N2E2_4114 at 4792.313 kb on + strand, within Pf6N2E2_4114 at 4792.357 kb on + strand at 4792.358 kb on - strand at 4792.359 kb on + strand at 4792.359 kb on + strand at 4792.507 kb on - strand at 4792.510 kb on + strand at 4792.655 kb on - strand at 4792.695 kb on - strand at 4792.695 kb on - strand at 4792.751 kb on - strand at 4792.770 kb on + strand at 4792.842 kb on + strand at 4792.847 kb on + strand at 4792.981 kb on + strand at 4792.984 kb on - strand at 4792.984 kb on - strand at 4792.987 kb on + strand at 4792.987 kb on + strand at 4792.987 kb on + strand at 4792.987 kb on + strand at 4793.029 kb on + strand at 4793.083 kb on + strand at 4793.084 kb on - strand at 4793.084 kb on - strand at 4793.117 kb on + strand at 4793.118 kb on - strand at 4793.118 kb on - strand at 4793.170 kb on + strand at 4793.170 kb on + strand at 4793.170 kb on + strand at 4793.171 kb on - strand at 4793.171 kb on - strand at 4793.171 kb on - strand at 4793.183 kb on + strand at 4793.184 kb on - strand at 4793.206 kb on + strand at 4793.233 kb on + strand at 4793.234 kb on - strand at 4793.353 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.4 mM remove 4,791,232 + Pf6N2E2_4112 0.64 +0.5 4,791,232 + Pf6N2E2_4112 0.64 +0.8 4,791,232 + Pf6N2E2_4112 0.64 -0.2 4,791,232 + Pf6N2E2_4112 0.64 +0.1 4,791,233 - Pf6N2E2_4112 0.64 -0.5 4,791,233 - Pf6N2E2_4112 0.64 +0.4 4,791,233 - Pf6N2E2_4112 0.64 +0.3 4,791,332 + Pf6N2E2_4112 0.76 -0.3 4,791,376 + Pf6N2E2_4112 0.81 -1.3 4,791,377 - Pf6N2E2_4112 0.81 +1.7 4,791,540 + +0.5 4,791,540 + -1.0 4,791,540 + -0.1 4,791,540 + +0.6 4,791,540 + -0.5 4,791,540 + -0.6 4,791,540 + -0.0 4,791,540 + +1.1 4,791,540 + -1.3 4,791,541 - +0.1 4,791,541 - +0.3 4,791,541 - +0.4 4,791,541 - +0.2 4,791,541 - -0.6 4,791,572 + +0.4 4,791,572 + -0.1 4,791,572 + -0.3 4,791,572 + -0.1 4,791,572 + +0.5 4,791,572 + -0.2 4,791,573 - -1.2 4,791,580 + +0.1 4,791,599 - +1.9 4,791,599 - +0.0 4,791,606 + +0.2 4,791,607 - +0.5 4,791,613 - -0.1 4,791,613 - -0.2 4,791,616 + +0.9 4,791,616 + +1.0 4,791,902 + Pf6N2E2_4113 0.69 -0.5 4,791,903 - Pf6N2E2_4113 0.69 -1.4 4,791,903 - Pf6N2E2_4113 0.69 +0.3 4,791,985 + Pf6N2E2_4113 0.89 -0.4 4,792,066 + +0.2 4,792,066 + +0.5 4,792,067 - -0.1 4,792,067 - +0.1 4,792,115 + -1.1 4,792,116 - +0.1 4,792,119 + +2.6 4,792,119 + -0.2 4,792,119 + +0.1 4,792,230 + Pf6N2E2_4114 0.36 +0.7 4,792,285 + Pf6N2E2_4114 0.61 +0.5 4,792,285 + Pf6N2E2_4114 0.61 -0.2 4,792,285 + Pf6N2E2_4114 0.61 +0.2 4,792,286 - Pf6N2E2_4114 0.62 -0.4 4,792,286 - Pf6N2E2_4114 0.62 +0.6 4,792,306 + Pf6N2E2_4114 0.71 +0.5 4,792,306 + Pf6N2E2_4114 0.71 -1.4 4,792,307 - Pf6N2E2_4114 0.71 +0.3 4,792,313 + Pf6N2E2_4114 0.74 -0.0 4,792,357 + +0.6 4,792,358 - -2.3 4,792,359 + -1.1 4,792,359 + +0.4 4,792,507 - -0.6 4,792,510 + +0.7 4,792,655 - -2.0 4,792,695 - -2.0 4,792,695 - +0.2 4,792,751 - +0.0 4,792,770 + +1.6 4,792,842 + +2.6 4,792,847 + -1.2 4,792,981 + -2.3 4,792,984 - +3.2 4,792,984 - +0.3 4,792,987 + +0.3 4,792,987 + +0.6 4,792,987 + -0.8 4,792,987 + -0.7 4,793,029 + +0.0 4,793,083 + +1.0 4,793,084 - -1.2 4,793,084 - -1.4 4,793,117 + -0.3 4,793,118 - +0.4 4,793,118 - -1.0 4,793,170 + +1.3 4,793,170 + +0.1 4,793,170 + +0.6 4,793,171 - -0.4 4,793,171 - +1.1 4,793,171 - -2.1 4,793,183 + +0.3 4,793,184 - -0.6 4,793,206 + -0.3 4,793,233 + +1.2 4,793,234 - +2.6 4,793,353 + -0.2
Or see this region's nucleotide sequence