Experiment: Cobalt chloride 0.4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2386 and Pf6N2E2_2387 are separated by 25 nucleotides Pf6N2E2_2387 and Pf6N2E2_2388 are separated by 126 nucleotides
Pf6N2E2_2386 - Magnesium and cobalt transport protein CorA, at 2,824,342 to 2,825,337
_2386
Pf6N2E2_2387 - Ribonuclease E inhibitor RraA, at 2,825,363 to 2,825,854
_2387
Pf6N2E2_2388 - Esterase/lipase/thioesterase family protein, at 2,825,981 to 2,826,970
_2388
Position (kb)
2825
2826 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2824.523 kb on + strand, within Pf6N2E2_2386 at 2824.523 kb on + strand, within Pf6N2E2_2386 at 2824.524 kb on - strand, within Pf6N2E2_2386 at 2824.650 kb on - strand, within Pf6N2E2_2386 at 2824.787 kb on + strand, within Pf6N2E2_2386 at 2824.787 kb on + strand, within Pf6N2E2_2386 at 2824.788 kb on - strand, within Pf6N2E2_2386 at 2824.788 kb on - strand, within Pf6N2E2_2386 at 2824.788 kb on - strand, within Pf6N2E2_2386 at 2824.886 kb on + strand, within Pf6N2E2_2386 at 2824.887 kb on - strand, within Pf6N2E2_2386 at 2825.356 kb on + strand at 2825.356 kb on + strand at 2825.357 kb on - strand at 2825.419 kb on - strand, within Pf6N2E2_2387 at 2825.419 kb on - strand, within Pf6N2E2_2387 at 2825.419 kb on - strand, within Pf6N2E2_2387 at 2825.419 kb on - strand, within Pf6N2E2_2387 at 2825.424 kb on + strand, within Pf6N2E2_2387 at 2825.424 kb on + strand, within Pf6N2E2_2387 at 2825.424 kb on + strand, within Pf6N2E2_2387 at 2825.425 kb on - strand, within Pf6N2E2_2387 at 2825.425 kb on - strand, within Pf6N2E2_2387 at 2825.574 kb on + strand, within Pf6N2E2_2387 at 2825.844 kb on + strand at 2825.845 kb on - strand at 2825.930 kb on - strand at 2825.930 kb on - strand at 2826.447 kb on + strand, within Pf6N2E2_2388 at 2826.447 kb on + strand, within Pf6N2E2_2388 at 2826.447 kb on + strand, within Pf6N2E2_2388 at 2826.451 kb on + strand, within Pf6N2E2_2388 at 2826.452 kb on - strand, within Pf6N2E2_2388 at 2826.507 kb on + strand, within Pf6N2E2_2388 at 2826.726 kb on + strand, within Pf6N2E2_2388
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.4 mM remove 2,824,523 + Pf6N2E2_2386 0.18 +1.0 2,824,523 + Pf6N2E2_2386 0.18 +1.0 2,824,524 - Pf6N2E2_2386 0.18 +0.0 2,824,650 - Pf6N2E2_2386 0.31 +0.0 2,824,787 + Pf6N2E2_2386 0.45 +1.0 2,824,787 + Pf6N2E2_2386 0.45 +1.0 2,824,788 - Pf6N2E2_2386 0.45 -1.3 2,824,788 - Pf6N2E2_2386 0.45 -1.8 2,824,788 - Pf6N2E2_2386 0.45 -1.6 2,824,886 + Pf6N2E2_2386 0.55 +0.0 2,824,887 - Pf6N2E2_2386 0.55 -0.6 2,825,356 + +1.0 2,825,356 + +1.0 2,825,357 - -0.5 2,825,419 - Pf6N2E2_2387 0.11 -3.4 2,825,419 - Pf6N2E2_2387 0.11 -0.6 2,825,419 - Pf6N2E2_2387 0.11 +1.0 2,825,419 - Pf6N2E2_2387 0.11 -1.7 2,825,424 + Pf6N2E2_2387 0.12 +1.0 2,825,424 + Pf6N2E2_2387 0.12 +1.0 2,825,424 + Pf6N2E2_2387 0.12 +1.0 2,825,425 - Pf6N2E2_2387 0.13 +0.0 2,825,425 - Pf6N2E2_2387 0.13 +0.3 2,825,574 + Pf6N2E2_2387 0.43 +1.0 2,825,844 + +0.4 2,825,845 - -0.6 2,825,930 - -0.4 2,825,930 - -1.0 2,826,447 + Pf6N2E2_2388 0.47 -0.3 2,826,447 + Pf6N2E2_2388 0.47 +0.4 2,826,447 + Pf6N2E2_2388 0.47 +0.6 2,826,451 + Pf6N2E2_2388 0.47 +2.6 2,826,452 - Pf6N2E2_2388 0.48 +0.1 2,826,507 + Pf6N2E2_2388 0.53 -1.3 2,826,726 + Pf6N2E2_2388 0.75 +0.4
Or see this region's nucleotide sequence