Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5862

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
6,681,653	-				+0.6
6,681,673	+				+0.4
6,681,673	+				+0.8
6,681,673	+				+1.0
6,681,674	-				-0.4
6,681,674	-				-0.7
6,681,674	-				-0.4
6,681,674	-				+0.0
6,681,674	-				-0.6
6,681,674	-				+0.7
6,681,674	-				-0.0
6,681,955	-		Pf6N2E2_5861	0.36	+1.0
6,681,996	+		Pf6N2E2_5861	0.42	+0.7
6,681,996	+		Pf6N2E2_5861	0.42	-0.5
6,681,996	+		Pf6N2E2_5861	0.42	-0.0
6,681,996	+		Pf6N2E2_5861	0.42	+0.2
6,681,996	+		Pf6N2E2_5861	0.42	-1.2
6,681,996	+		Pf6N2E2_5861	0.42	+0.5
6,681,996	+		Pf6N2E2_5861	0.42	-1.6
6,681,997	-		Pf6N2E2_5861	0.42	+1.0
6,681,997	-		Pf6N2E2_5861	0.42	+0.7
6,681,997	-		Pf6N2E2_5861	0.42	-0.8
6,681,997	-		Pf6N2E2_5861	0.42	-0.0
6,681,997	-		Pf6N2E2_5861	0.42	+0.5
6,681,997	-		Pf6N2E2_5861	0.42	+1.0
6,682,067	+		Pf6N2E2_5861	0.52	+0.7
6,682,104	-		Pf6N2E2_5861	0.57	-0.6
6,682,104	-		Pf6N2E2_5861	0.57	-0.4
6,682,104	-		Pf6N2E2_5861	0.57	+0.1
6,682,104	-		Pf6N2E2_5861	0.57	+0.6
6,682,247	+		Pf6N2E2_5861	0.76	-0.6
6,682,251	-		Pf6N2E2_5861	0.77	+1.0
6,682,294	-		Pf6N2E2_5861	0.82	+0.2
6,682,294	-		Pf6N2E2_5861	0.82	+3.0
6,682,332	-		Pf6N2E2_5861	0.88	-0.0
6,682,332	-		Pf6N2E2_5861	0.88	+0.1
6,682,332	-		Pf6N2E2_5861	0.88	-0.1
6,682,373	+				+0.9
6,682,373	+				-1.1
6,682,373	+				+0.5
6,682,373	+				-0.2
6,682,373	+				-1.9
6,682,373	+				-0.1
6,682,373	+				-0.6
6,682,373	+				-1.1
6,682,374	-				-1.1
6,682,374	-				+0.2
6,682,374	-				-1.1
6,682,374	-				-1.1
6,682,374	-				-0.6
6,682,374	-				-1.4
6,682,375	+				+0.3
6,682,376	-				+1.9
6,682,487	-				-0.6
6,682,494	+				+0.2
6,682,495	-				-0.1
6,682,603	+		Pf6N2E2_5862	0.43	+0.9
6,682,604	-		Pf6N2E2_5862	0.43	-1.6
6,682,738	+				+1.3
6,682,771	+				+0.4
6,682,772	-				-2.5
6,682,772	-				-1.5
6,682,802	-				-0.4
6,682,823	+				-1.3
6,682,823	+				+0.5
6,682,823	+				+0.9
6,682,823	+				-0.5
6,682,824	-				+1.8
6,682,824	-				+0.9
6,682,824	-				-1.1
6,682,824	-				-1.4
6,682,825	+				+0.1
6,682,826	-				+1.5
6,682,826	-				+0.5
6,682,826	-				+1.4
6,682,826	-				-0.5
6,682,826	-				+1.5
6,682,827	+				+0.3
6,682,827	+				-0.3
6,682,827	+				+0.4
6,682,827	+				-0.9
6,682,827	+				-0.6
6,682,828	-				+0.9
6,682,828	-				-1.4
6,682,828	-				-0.1
6,682,828	-				-1.4
6,682,828	-				-0.3
6,682,828	-				+0.5
6,683,105	+		Pf6N2E2_5863	0.43	+0.5
6,683,105	+		Pf6N2E2_5863	0.43	+0.5
6,683,105	+		Pf6N2E2_5863	0.43	-1.1
6,683,106	-		Pf6N2E2_5863	0.43	+0.5
6,683,106	-		Pf6N2E2_5863	0.43	-0.2
6,683,169	+		Pf6N2E2_5863	0.56	-0.1
6,683,169	+		Pf6N2E2_5863	0.56	+0.0
6,683,169	+		Pf6N2E2_5863	0.56	+1.9
6,683,169	+		Pf6N2E2_5863	0.56	+0.4
6,683,170	-		Pf6N2E2_5863	0.56	+0.3
6,683,170	-		Pf6N2E2_5863	0.56	+0.4
6,683,203	-		Pf6N2E2_5863	0.63	-1.9
6,683,427	-		Pf6N2E2_5864	0.11	+0.2
6,683,453	+		Pf6N2E2_5864	0.17	-0.9
6,683,454	-		Pf6N2E2_5864	0.17	-0.3
6,683,536	+		Pf6N2E2_5864	0.35	+0.4
6,683,545	-		Pf6N2E2_5864	0.37	+0.5
6,683,663	+		Pf6N2E2_5864	0.62	+1.9
6,683,664	-		Pf6N2E2_5864	0.63	-0.3
6,683,693	+		Pf6N2E2_5864	0.69	+0.9
6,683,693	+		Pf6N2E2_5864	0.69	-0.2
6,683,693	+		Pf6N2E2_5864	0.69	+0.9
6,683,694	-		Pf6N2E2_5864	0.69	+0.2
6,683,694	-		Pf6N2E2_5864	0.69	+1.9
6,683,694	-		Pf6N2E2_5864	0.69	-0.3