Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_433 and Pf6N2E2_434 overlap by 4 nucleotides Pf6N2E2_434 and Pf6N2E2_435 are separated by 15 nucleotides Pf6N2E2_435 and Pf6N2E2_436 overlap by 37 nucleotides
Pf6N2E2_433 - Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9), at 500,337 to 501,410
_433
Pf6N2E2_434 - hypothetical protein, at 501,407 to 501,544
_434
Pf6N2E2_435 - Probable transcription regulator, at 501,560 to 502,048
_435
Pf6N2E2_436 - ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63), at 502,012 to 503,085
_436
Position (kb) 501
502
503 Strain fitness (log2 ratio) -2
-1
0
1 at 500.677 kb on + strand, within Pf6N2E2_433 at 500.870 kb on - strand, within Pf6N2E2_433 at 501.122 kb on - strand, within Pf6N2E2_433 at 501.122 kb on - strand, within Pf6N2E2_433 at 501.122 kb on - strand, within Pf6N2E2_433 at 501.122 kb on - strand, within Pf6N2E2_433 at 501.448 kb on + strand, within Pf6N2E2_434 at 501.448 kb on + strand, within Pf6N2E2_434 at 501.525 kb on - strand, within Pf6N2E2_434 at 501.540 kb on + strand at 501.541 kb on - strand at 501.541 kb on - strand at 501.743 kb on + strand, within Pf6N2E2_435 at 501.744 kb on - strand, within Pf6N2E2_435 at 501.744 kb on - strand, within Pf6N2E2_435 at 501.744 kb on - strand, within Pf6N2E2_435 at 501.753 kb on - strand, within Pf6N2E2_435 at 501.851 kb on + strand, within Pf6N2E2_435 at 501.851 kb on + strand, within Pf6N2E2_435 at 501.920 kb on + strand, within Pf6N2E2_435 at 501.921 kb on - strand, within Pf6N2E2_435 at 501.975 kb on - strand, within Pf6N2E2_435 at 502.001 kb on + strand at 502.001 kb on + strand at 502.002 kb on - strand at 502.002 kb on - strand at 502.002 kb on - strand at 502.099 kb on + strand at 502.100 kb on - strand at 502.206 kb on - strand, within Pf6N2E2_436 at 502.300 kb on + strand, within Pf6N2E2_436 at 502.301 kb on - strand, within Pf6N2E2_436 at 502.301 kb on - strand, within Pf6N2E2_436 at 502.577 kb on + strand, within Pf6N2E2_436 at 502.578 kb on - strand, within Pf6N2E2_436 at 502.578 kb on - strand, within Pf6N2E2_436 at 502.578 kb on - strand, within Pf6N2E2_436 at 502.610 kb on + strand, within Pf6N2E2_436 at 502.610 kb on + strand, within Pf6N2E2_436 at 502.610 kb on + strand, within Pf6N2E2_436 at 502.967 kb on + strand, within Pf6N2E2_436 at 502.967 kb on + strand, within Pf6N2E2_436 at 502.967 kb on + strand, within Pf6N2E2_436 at 502.967 kb on + strand, within Pf6N2E2_436 at 502.967 kb on + strand, within Pf6N2E2_436 at 502.967 kb on + strand, within Pf6N2E2_436 at 502.967 kb on + strand, within Pf6N2E2_436 at 502.968 kb on - strand, within Pf6N2E2_436 at 502.968 kb on - strand, within Pf6N2E2_436 at 502.968 kb on - strand, within Pf6N2E2_436 at 502.984 kb on + strand at 502.991 kb on + strand at 502.991 kb on + strand at 502.992 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1 mM remove 500,677 + Pf6N2E2_433 0.32 -1.0 500,870 - Pf6N2E2_433 0.50 +0.0 501,122 - Pf6N2E2_433 0.73 +0.0 501,122 - Pf6N2E2_433 0.73 +0.3 501,122 - Pf6N2E2_433 0.73 +0.6 501,122 - Pf6N2E2_433 0.73 +0.2 501,448 + Pf6N2E2_434 0.30 -1.0 501,448 + Pf6N2E2_434 0.30 -2.2 501,525 - Pf6N2E2_434 0.86 +0.7 501,540 + -0.6 501,541 - +0.6 501,541 - -1.8 501,743 + Pf6N2E2_435 0.37 -1.0 501,744 - Pf6N2E2_435 0.38 -1.1 501,744 - Pf6N2E2_435 0.38 +1.7 501,744 - Pf6N2E2_435 0.38 +0.3 501,753 - Pf6N2E2_435 0.39 -0.6 501,851 + Pf6N2E2_435 0.60 -1.0 501,851 + Pf6N2E2_435 0.60 +1.4 501,920 + Pf6N2E2_435 0.74 -0.3 501,921 - Pf6N2E2_435 0.74 -0.8 501,975 - Pf6N2E2_435 0.85 -0.3 502,001 + -0.3 502,001 + -0.3 502,002 - -0.3 502,002 - -0.3 502,002 - -0.1 502,099 + -1.0 502,100 - +0.7 502,206 - Pf6N2E2_436 0.18 +1.7 502,300 + Pf6N2E2_436 0.27 -0.5 502,301 - Pf6N2E2_436 0.27 +0.5 502,301 - Pf6N2E2_436 0.27 +0.7 502,577 + Pf6N2E2_436 0.53 -0.1 502,578 - Pf6N2E2_436 0.53 +0.5 502,578 - Pf6N2E2_436 0.53 +0.2 502,578 - Pf6N2E2_436 0.53 -1.7 502,610 + Pf6N2E2_436 0.56 +0.3 502,610 + Pf6N2E2_436 0.56 +0.2 502,610 + Pf6N2E2_436 0.56 -0.3 502,967 + Pf6N2E2_436 0.89 -0.5 502,967 + Pf6N2E2_436 0.89 +0.4 502,967 + Pf6N2E2_436 0.89 -0.8 502,967 + Pf6N2E2_436 0.89 +1.3 502,967 + Pf6N2E2_436 0.89 -1.6 502,967 + Pf6N2E2_436 0.89 +0.2 502,967 + Pf6N2E2_436 0.89 +0.4 502,968 - Pf6N2E2_436 0.89 -0.7 502,968 - Pf6N2E2_436 0.89 +0.6 502,968 - Pf6N2E2_436 0.89 -0.3 502,984 + -0.5 502,991 + -0.2 502,991 + +0.3 502,992 - +0.7
Or see this region's nucleotide sequence