Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4048

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
4,728,053	+				+0.7
4,728,054	-				-1.7
4,728,054	-				-0.7
4,728,405	-		Pf6N2E2_4047	0.35	+1.5
4,728,405	-		Pf6N2E2_4047	0.35	-1.5
4,728,405	-		Pf6N2E2_4047	0.35	-0.2
4,728,405	-		Pf6N2E2_4047	0.35	+1.1
4,728,405	-		Pf6N2E2_4047	0.35	+0.1
4,728,405	-		Pf6N2E2_4047	0.35	+0.1
4,728,405	-		Pf6N2E2_4047	0.35	-0.5
4,728,405	-		Pf6N2E2_4047	0.35	-0.1
4,728,408	-		Pf6N2E2_4047	0.36	-2.2
4,728,408	-		Pf6N2E2_4047	0.36	-0.8
4,728,408	-		Pf6N2E2_4047	0.36	+0.4
4,728,409	+		Pf6N2E2_4047	0.36	+0.5
4,728,410	-		Pf6N2E2_4047	0.36	-1.1
4,728,410	-		Pf6N2E2_4047	0.36	-0.5
4,728,410	-		Pf6N2E2_4047	0.36	-0.8
4,728,410	-		Pf6N2E2_4047	0.36	-1.6
4,728,410	-		Pf6N2E2_4047	0.36	+0.3
4,728,410	-		Pf6N2E2_4047	0.36	-0.3
4,728,410	-		Pf6N2E2_4047	0.36	-0.3
4,728,410	-		Pf6N2E2_4047	0.36	+0.9
4,728,410	-		Pf6N2E2_4047	0.36	-2.1
4,728,627	-		Pf6N2E2_4047	0.63	+0.2
4,728,627	-		Pf6N2E2_4047	0.63	-0.4
4,729,157	-		Pf6N2E2_4048	0.18	+1.1
4,729,157	-		Pf6N2E2_4048	0.18	-0.3
4,729,294	-		Pf6N2E2_4048	0.30	-0.8
4,729,294	-		Pf6N2E2_4048	0.30	-1.1
4,729,571	-		Pf6N2E2_4048	0.52	-0.6
4,729,571	-		Pf6N2E2_4048	0.52	-1.8
4,729,571	-		Pf6N2E2_4048	0.52	+1.3
4,729,571	-		Pf6N2E2_4048	0.52	+0.5
4,729,730	-		Pf6N2E2_4048	0.65	-1.1
4,729,730	-		Pf6N2E2_4048	0.65	-0.6
4,729,730	-		Pf6N2E2_4048	0.65	+0.2
4,729,730	-		Pf6N2E2_4048	0.65	-0.5
4,729,730	-		Pf6N2E2_4048	0.65	-0.4
4,729,907	-		Pf6N2E2_4048	0.79	-0.6
4,729,907	-		Pf6N2E2_4048	0.79	-0.4
4,729,907	-		Pf6N2E2_4048	0.79	-0.2
4,729,907	-		Pf6N2E2_4048	0.79	-0.1
4,729,907	-		Pf6N2E2_4048	0.79	-1.1
4,729,907	-		Pf6N2E2_4048	0.79	-0.6
4,729,928	-		Pf6N2E2_4048	0.81	-0.7
4,729,952	-		Pf6N2E2_4048	0.83	-0.9
4,729,952	-		Pf6N2E2_4048	0.83	+0.1
4,729,952	-		Pf6N2E2_4048	0.83	-0.8
4,729,976	-		Pf6N2E2_4048	0.85	-0.1
4,730,084	-				-0.5
4,730,084	-				-0.9
4,730,084	-				-0.5
4,730,084	-				-0.1
4,730,207	+				+1.1
4,730,207	+				+0.5
4,730,208	-				-0.0
4,730,208	-				-0.2
4,730,343	-				+1.3
4,730,384	+		Pf6N2E2_4049	0.12	-0.6
4,730,385	-		Pf6N2E2_4049	0.12	+0.5
4,730,601	+		Pf6N2E2_4049	0.36	-0.1
4,730,602	-		Pf6N2E2_4049	0.36	+1.5
4,730,602	-		Pf6N2E2_4049	0.36	-0.9
4,730,711	+		Pf6N2E2_4049	0.47	-0.5
4,730,711	+		Pf6N2E2_4049	0.47	+0.4
4,730,749	+		Pf6N2E2_4049	0.52	-0.1
4,730,749	+		Pf6N2E2_4049	0.52	+0.1
4,730,749	+		Pf6N2E2_4049	0.52	-0.1
4,730,749	+		Pf6N2E2_4049	0.52	+0.4
4,730,750	-		Pf6N2E2_4049	0.52	-0.5
4,730,750	-		Pf6N2E2_4049	0.52	-0.1
4,730,750	-		Pf6N2E2_4049	0.52	-0.1
4,730,795	-		Pf6N2E2_4049	0.57	-0.5
4,730,953	+		Pf6N2E2_4049	0.74	+0.9
4,730,953	+		Pf6N2E2_4049	0.74	-0.1
4,730,954	-		Pf6N2E2_4049	0.74	-0.7
4,730,954	-		Pf6N2E2_4049	0.74	+0.2
4,730,954	-		Pf6N2E2_4049	0.74	-1.1
4,730,954	-		Pf6N2E2_4049	0.74	-0.6
4,730,954	-		Pf6N2E2_4049	0.74	+1.4
4,730,954	-		Pf6N2E2_4049	0.74	+1.0
4,730,956	+		Pf6N2E2_4049	0.74	+0.3
4,730,956	+		Pf6N2E2_4049	0.74	+0.8
4,730,956	+		Pf6N2E2_4049	0.74	+2.5
4,730,957	-		Pf6N2E2_4049	0.74	+1.2
4,730,957	-		Pf6N2E2_4049	0.74	-0.6
4,730,957	-		Pf6N2E2_4049	0.74	+0.6