Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3448

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
4,015,727	+		Pf6N2E2_3446	0.25	+0.7
4,015,727	+		Pf6N2E2_3446	0.25	+0.1
4,015,728	-		Pf6N2E2_3446	0.25	-0.9
4,015,728	-		Pf6N2E2_3446	0.25	-0.1
4,015,728	-		Pf6N2E2_3446	0.25	-1.1
4,015,814	+		Pf6N2E2_3446	0.40	-0.7
4,015,814	+		Pf6N2E2_3446	0.40	-0.8
4,015,814	+		Pf6N2E2_3446	0.40	-0.5
4,015,814	+		Pf6N2E2_3446	0.40	-0.9
4,015,814	+		Pf6N2E2_3446	0.40	+0.1
4,015,814	+		Pf6N2E2_3446	0.40	+0.8
4,015,814	+		Pf6N2E2_3446	0.40	-0.6
4,015,814	+		Pf6N2E2_3446	0.40	-0.5
4,015,814	+		Pf6N2E2_3446	0.40	-0.2
4,015,814	+		Pf6N2E2_3446	0.40	+1.8
4,015,815	-		Pf6N2E2_3446	0.40	+0.3
4,015,815	-		Pf6N2E2_3446	0.40	-0.5
4,015,815	-		Pf6N2E2_3446	0.40	+0.2
4,015,815	-		Pf6N2E2_3446	0.40	-0.1
4,015,815	-		Pf6N2E2_3446	0.40	+0.8
4,015,815	-		Pf6N2E2_3446	0.40	+0.3
4,015,815	-		Pf6N2E2_3446	0.40	-0.6
4,015,815	-		Pf6N2E2_3446	0.40	+2.2
4,015,847	+		Pf6N2E2_3446	0.45	+0.2
4,015,889	+		Pf6N2E2_3446	0.52	+0.8
4,015,890	-		Pf6N2E2_3446	0.53	+0.4
4,015,929	-		Pf6N2E2_3446	0.59	+2.0
4,016,111	+				+0.3
4,016,111	+				+1.0
4,016,271	-				-0.1
4,016,450	+		Pf6N2E2_3447	0.26	-0.7
4,016,489	+		Pf6N2E2_3447	0.38	-0.6
4,016,489	+		Pf6N2E2_3447	0.38	+0.1
4,016,490	-		Pf6N2E2_3447	0.38	+1.3
4,016,490	-		Pf6N2E2_3447	0.38	-0.5
4,016,527	+		Pf6N2E2_3447	0.50	-0.3
4,016,534	+		Pf6N2E2_3447	0.52	+0.2
4,016,535	-		Pf6N2E2_3447	0.53	-0.3
4,016,619	-		Pf6N2E2_3447	0.79	-0.2
4,016,724	+				-0.9
4,016,877	-		Pf6N2E2_3448	0.27	-0.1
4,016,945	-		Pf6N2E2_3448	0.36	-2.8
4,017,079	+		Pf6N2E2_3448	0.53	-1.4
4,017,080	-		Pf6N2E2_3448	0.53	-0.1
4,017,080	-		Pf6N2E2_3448	0.53	+0.4
4,017,080	-		Pf6N2E2_3448	0.53	-1.3
4,017,080	-		Pf6N2E2_3448	0.53	-0.7
4,017,080	-		Pf6N2E2_3448	0.53	-1.9
4,017,080	-		Pf6N2E2_3448	0.53	-0.5
4,017,147	-		Pf6N2E2_3448	0.62	-0.8
4,017,147	-		Pf6N2E2_3448	0.62	+0.9
4,017,415	+				-0.4
4,017,480	+				+0.1
4,017,482	+				+0.0
4,017,482	+				+0.7
4,017,482	+				+1.3
4,017,483	-				+0.3
4,017,543	-				+0.9
4,017,596	-				-0.9
4,017,612	+				-0.8
4,017,901	-		Pf6N2E2_3449	0.36	-1.4
4,017,901	-		Pf6N2E2_3449	0.36	+0.3
4,018,085	-		Pf6N2E2_3449	0.57	+0.7
4,018,129	+		Pf6N2E2_3449	0.62	+1.2
4,018,158	+		Pf6N2E2_3449	0.65	-0.1
4,018,158	+		Pf6N2E2_3449	0.65	-0.2
4,018,159	-		Pf6N2E2_3449	0.65	+0.5
4,018,159	-		Pf6N2E2_3449	0.65	-1.1
4,018,159	-		Pf6N2E2_3449	0.65	-0.4
4,018,159	-		Pf6N2E2_3449	0.65	-0.6
4,018,159	-		Pf6N2E2_3449	0.65	-1.1
4,018,159	-		Pf6N2E2_3449	0.65	+0.6
4,018,229	+		Pf6N2E2_3449	0.73	+0.6
4,018,229	+		Pf6N2E2_3449	0.73	-0.3
4,018,229	+		Pf6N2E2_3449	0.73	-0.7
4,018,229	+		Pf6N2E2_3449	0.73	+0.8
4,018,230	-		Pf6N2E2_3449	0.73	+0.5
4,018,230	-		Pf6N2E2_3449	0.73	+0.3
4,018,230	-		Pf6N2E2_3449	0.73	+0.6
4,018,230	-		Pf6N2E2_3449	0.73	+0.9
4,018,230	-		Pf6N2E2_3449	0.73	-1.1
4,018,230	-		Pf6N2E2_3449	0.73	-0.7
4,018,230	-		Pf6N2E2_3449	0.73	+0.3
4,018,230	-		Pf6N2E2_3449	0.73	+0.3
4,018,230	-		Pf6N2E2_3449	0.73	+0.5
4,018,274	+		Pf6N2E2_3449	0.78	-1.0
4,018,274	+		Pf6N2E2_3449	0.78	-0.1
4,018,275	-		Pf6N2E2_3449	0.79	+1.3
4,018,275	-		Pf6N2E2_3449	0.79	-0.1
4,018,275	-		Pf6N2E2_3449	0.79	-0.4
4,018,347	+		Pf6N2E2_3449	0.87	-0.2
4,018,347	+		Pf6N2E2_3449	0.87	+0.3
4,018,347	+		Pf6N2E2_3449	0.87	-1.1
4,018,348	-		Pf6N2E2_3449	0.87	+1.1
4,018,348	-		Pf6N2E2_3449	0.87	+0.8