Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3121 and Pf6N2E2_3122 overlap by 4 nucleotides Pf6N2E2_3122 and Pf6N2E2_3123 overlap by 1 nucleotides
Pf6N2E2_3121 - Chemotaxis protein methyltransferase CheR (EC 2.1.1.80), at 3,611,012 to 3,612,277
_3121
Pf6N2E2_3122 - Chemotaxis signal transduction protein, at 3,612,274 to 3,612,810
_3122
Pf6N2E2_3123 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 3,612,810 to 3,614,432
_3123
Position (kb)
3612
3613 Strain fitness (log2 ratio)
-2
-1
0
1 at 3611.317 kb on + strand, within Pf6N2E2_3121 at 3611.570 kb on - strand, within Pf6N2E2_3121 at 3611.787 kb on + strand, within Pf6N2E2_3121 at 3611.787 kb on + strand, within Pf6N2E2_3121 at 3611.787 kb on + strand, within Pf6N2E2_3121 at 3611.944 kb on - strand, within Pf6N2E2_3121 at 3612.141 kb on + strand, within Pf6N2E2_3121 at 3612.141 kb on + strand, within Pf6N2E2_3121 at 3612.142 kb on - strand, within Pf6N2E2_3121 at 3612.411 kb on - strand, within Pf6N2E2_3122 at 3612.411 kb on - strand, within Pf6N2E2_3122 at 3612.438 kb on - strand, within Pf6N2E2_3122 at 3613.162 kb on + strand, within Pf6N2E2_3123 at 3613.162 kb on + strand, within Pf6N2E2_3123 at 3613.162 kb on + strand, within Pf6N2E2_3123 at 3613.162 kb on + strand, within Pf6N2E2_3123 at 3613.163 kb on - strand, within Pf6N2E2_3123 at 3613.163 kb on - strand, within Pf6N2E2_3123 at 3613.163 kb on - strand, within Pf6N2E2_3123 at 3613.163 kb on - strand, within Pf6N2E2_3123 at 3613.163 kb on - strand, within Pf6N2E2_3123 at 3613.197 kb on + strand, within Pf6N2E2_3123 at 3613.197 kb on + strand, within Pf6N2E2_3123 at 3613.198 kb on - strand, within Pf6N2E2_3123 at 3613.198 kb on - strand, within Pf6N2E2_3123 at 3613.198 kb on - strand, within Pf6N2E2_3123 at 3613.232 kb on - strand, within Pf6N2E2_3123 at 3613.810 kb on - strand, within Pf6N2E2_3123
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1 mM remove 3,611,317 + Pf6N2E2_3121 0.24 -0.5 3,611,570 - Pf6N2E2_3121 0.44 +0.1 3,611,787 + Pf6N2E2_3121 0.61 +0.0 3,611,787 + Pf6N2E2_3121 0.61 +0.2 3,611,787 + Pf6N2E2_3121 0.61 +1.1 3,611,944 - Pf6N2E2_3121 0.74 -1.9 3,612,141 + Pf6N2E2_3121 0.89 +0.1 3,612,141 + Pf6N2E2_3121 0.89 +0.1 3,612,142 - Pf6N2E2_3121 0.89 -1.4 3,612,411 - Pf6N2E2_3122 0.26 -0.6 3,612,411 - Pf6N2E2_3122 0.26 -1.5 3,612,438 - Pf6N2E2_3122 0.31 +0.6 3,613,162 + Pf6N2E2_3123 0.22 +0.1 3,613,162 + Pf6N2E2_3123 0.22 +0.8 3,613,162 + Pf6N2E2_3123 0.22 +1.1 3,613,162 + Pf6N2E2_3123 0.22 +0.5 3,613,163 - Pf6N2E2_3123 0.22 -0.4 3,613,163 - Pf6N2E2_3123 0.22 +0.6 3,613,163 - Pf6N2E2_3123 0.22 -0.7 3,613,163 - Pf6N2E2_3123 0.22 +0.7 3,613,163 - Pf6N2E2_3123 0.22 +0.4 3,613,197 + Pf6N2E2_3123 0.24 -1.2 3,613,197 + Pf6N2E2_3123 0.24 -1.1 3,613,198 - Pf6N2E2_3123 0.24 +0.5 3,613,198 - Pf6N2E2_3123 0.24 +0.5 3,613,198 - Pf6N2E2_3123 0.24 -0.4 3,613,232 - Pf6N2E2_3123 0.26 +1.1 3,613,810 - Pf6N2E2_3123 0.62 -0.3
Or see this region's nucleotide sequence