Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2123
Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
2,525,453 | + | -0.6 | |||
2,525,552 | - | +0.8 | |||
2,525,657 | - | +1.1 | |||
2,525,922 | + | +0.8 | |||
2,525,923 | - | +0.8 | |||
2,526,060 | + | Pf6N2E2_2123 | 0.15 | -0.2 | |
2,526,061 | - | Pf6N2E2_2123 | 0.16 | -0.6 | |
2,526,071 | - | Pf6N2E2_2123 | 0.16 | -1.6 | |
2,526,359 | - | Pf6N2E2_2123 | 0.40 | -0.8 | |
2,526,488 | + | Pf6N2E2_2123 | 0.51 | -0.2 | |
2,526,489 | - | Pf6N2E2_2123 | 0.51 | -0.8 | |
2,526,515 | - | Pf6N2E2_2123 | 0.53 | +0.2 | |
2,526,777 | + | Pf6N2E2_2123 | 0.75 | -0.5 | |
2,526,896 | - | Pf6N2E2_2123 | 0.85 | -0.2 | |
2,526,998 | - | +0.8 | |||
2,527,096 | + | -1.1 | |||
2,527,201 | + | +1.0 | |||
2,527,275 | + | +0.8 | |||
2,527,276 | - | -1.8 | |||
2,527,314 | + | +1.2 | |||
2,527,315 | - | +0.4 | |||
2,527,443 | + | +0.8 | |||
2,527,559 | - | +0.8 | |||
2,527,641 | - | +0.5 | |||
2,528,053 | + | -1.2 |
Or see this region's nucleotide sequence