Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1653

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
1,958,410	+				+0.6
1,958,410	+				+0.6
1,958,410	+				-1.7
1,958,411	-				+0.6
1,958,439	+				-1.0
1,958,440	-				+0.6
1,958,462	+				-0.2
1,958,462	+				-2.2
1,958,796	-		Pf6N2E2_1652	0.57	-0.2
1,958,796	-		Pf6N2E2_1652	0.57	-0.9
1,958,796	-		Pf6N2E2_1652	0.57	+0.6
1,958,816	-		Pf6N2E2_1652	0.60	+0.6
1,959,245	+				+0.5
1,959,245	+				+0.4
1,959,246	-				-0.5
1,959,302	-				-0.2
1,959,347	+		Pf6N2E2_1653	0.12	-3.6
1,959,348	-		Pf6N2E2_1653	0.12	+1.9
1,959,350	+		Pf6N2E2_1653	0.12	-0.6
1,959,351	-		Pf6N2E2_1653	0.12	+0.1
1,959,420	-		Pf6N2E2_1653	0.18	+1.2
1,959,440	+		Pf6N2E2_1653	0.20	-2.0
1,959,610	-		Pf6N2E2_1653	0.36	-1.2
1,959,736	-		Pf6N2E2_1653	0.47	+0.7
1,960,088	+		Pf6N2E2_1653	0.79	-0.1
1,960,089	-		Pf6N2E2_1653	0.80	-1.4
1,960,089	-		Pf6N2E2_1653	0.80	-0.4
1,960,106	+		Pf6N2E2_1653	0.81	-0.9
1,960,107	-		Pf6N2E2_1653	0.81	-1.2
1,960,250	+				+0.8
1,960,251	-				-0.4
1,960,271	+				+0.2
1,960,342	+				+0.0
1,960,446	+				+0.9
1,960,560	-		Pf6N2E2_1654	0.22	+0.6
1,960,724	+		Pf6N2E2_1654	0.42	-0.7
1,960,846	-		Pf6N2E2_1654	0.58	-0.1
1,960,917	+		Pf6N2E2_1654	0.67	-1.0
1,960,921	+		Pf6N2E2_1654	0.67	+1.0
1,960,921	+		Pf6N2E2_1654	0.67	+0.2
1,961,261	-				+1.4