Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1563

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
1,823,782	+		Pf6N2E2_1562	0.16	+0.9
1,823,782	+		Pf6N2E2_1562	0.16	-1.4
1,823,782	+		Pf6N2E2_1562	0.16	+0.0
1,823,783	-		Pf6N2E2_1562	0.16	+3.2
1,823,783	-		Pf6N2E2_1562	0.16	+1.4
1,823,785	+		Pf6N2E2_1562	0.16	+0.6
1,823,786	-		Pf6N2E2_1562	0.16	+0.6
1,823,826	+		Pf6N2E2_1562	0.20	-0.5
1,823,851	+		Pf6N2E2_1562	0.23	-0.4
1,823,851	+		Pf6N2E2_1562	0.23	+0.0
1,823,851	+		Pf6N2E2_1562	0.23	+1.0
1,823,851	+		Pf6N2E2_1562	0.23	+0.3
1,823,851	+		Pf6N2E2_1562	0.23	-0.6
1,823,851	+		Pf6N2E2_1562	0.23	+1.0
1,823,852	-		Pf6N2E2_1562	0.23	-0.4
1,823,852	-		Pf6N2E2_1562	0.23	+0.6
1,823,852	-		Pf6N2E2_1562	0.23	+0.5
1,823,852	-		Pf6N2E2_1562	0.23	-0.2
1,823,852	-		Pf6N2E2_1562	0.23	+0.6
1,823,907	-		Pf6N2E2_1562	0.29	-1.1
1,823,907	-		Pf6N2E2_1562	0.29	-1.1
1,824,064	+		Pf6N2E2_1562	0.45	-2.0
1,824,064	+		Pf6N2E2_1562	0.45	-0.4
1,824,065	-		Pf6N2E2_1562	0.45	-0.2
1,824,065	-		Pf6N2E2_1562	0.45	-0.3
1,824,110	-		Pf6N2E2_1562	0.50	+0.6
1,824,276	-		Pf6N2E2_1562	0.67	+0.9
1,824,511	+				+1.9
1,824,538	+				+1.3
1,824,538	+				-1.5
1,824,539	-				-1.0
1,824,539	-				+1.0
1,824,539	-				-0.3
1,824,541	-				-1.2
1,824,541	-				+0.3
1,824,616	-				+1.2
1,824,678	-				+0.6
1,824,678	-				+0.9
1,824,680	+				-2.0
1,824,680	+				+0.6
1,824,680	+				+0.0
1,824,680	+				+0.8
1,824,680	+				+0.4
1,824,680	+				-0.8
1,824,680	+				-1.7
1,824,681	-				-0.8
1,824,681	-				+0.9
1,824,681	-				+0.5
1,824,681	-				+0.2
1,824,681	-				-1.2
1,824,681	-				-0.7
1,824,681	-				-0.2
1,824,681	-				+0.8
1,824,681	-				+1.6
1,824,681	-				+0.6
1,824,681	-				+1.0
1,824,681	-				+0.9
1,824,681	-				+0.6
1,824,681	-				-0.4
1,824,799	-		Pf6N2E2_1563	0.14	+0.4
1,824,960	+		Pf6N2E2_1563	0.34	-1.4
1,824,960	+		Pf6N2E2_1563	0.34	-0.3
1,824,960	+		Pf6N2E2_1563	0.34	-1.0
1,825,160	-		Pf6N2E2_1563	0.59	-1.6
1,825,160	-		Pf6N2E2_1563	0.59	-1.4
1,825,282	+		Pf6N2E2_1563	0.74	-0.2
1,825,596	-				-0.4
1,825,661	-				-0.3
1,825,697	+				-0.4
1,825,697	+				-0.4
1,825,719	-				+1.6
1,825,719	-				+0.6
1,825,919	+				+0.0
1,826,298	-		Pf6N2E2_1564	0.30	+0.1
1,826,308	-		Pf6N2E2_1564	0.30	+1.2
1,826,364	+		Pf6N2E2_1564	0.33	+0.3
1,826,459	+		Pf6N2E2_1564	0.38	+1.0
1,826,460	-		Pf6N2E2_1564	0.38	-0.6
1,826,460	-		Pf6N2E2_1564	0.38	+0.4
1,826,490	+				+1.2
1,826,491	-		Pf6N2E2_1564	0.40	+0.3
1,826,491	-		Pf6N2E2_1564	0.40	-1.0
1,826,491	-		Pf6N2E2_1564	0.40	-1.1
1,826,491	-		Pf6N2E2_1564	0.40	+0.3
1,826,491	-				+0.6