Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1168
Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
1,366,937 | + | -0.5 | |||
1,366,941 | + | +0.5 | |||
1,366,964 | + | +0.7 | |||
1,367,011 | + | -1.1 | |||
1,367,021 | + | +0.5 | |||
1,367,133 | + | -0.1 | |||
1,367,311 | - | Pf6N2E2_1166 | 0.47 | +1.2 | |
1,367,489 | - | +0.5 | |||
1,367,520 | + | +0.5 | |||
1,367,520 | + | +0.5 | |||
1,367,521 | - | +0.9 | |||
1,367,979 | - | Pf6N2E2_1168 | 0.20 | -0.7 | |
1,368,093 | - | Pf6N2E2_1168 | 0.48 | -0.7 | |
1,368,141 | - | Pf6N2E2_1168 | 0.60 | +0.5 | |
1,368,142 | + | Pf6N2E2_1168 | 0.61 | -0.5 | |
1,368,188 | + | Pf6N2E2_1168 | 0.72 | -1.1 | |
1,368,189 | - | Pf6N2E2_1168 | 0.72 | -0.5 | |
1,368,189 | - | Pf6N2E2_1168 | 0.72 | -1.1 | |
1,368,189 | - | Pf6N2E2_1168 | 0.72 | -1.5 | |
1,368,368 | - | -0.5 | |||
1,368,578 | + | Pf6N2E2_1169 | 0.45 | -0.3 | |
1,368,578 | + | Pf6N2E2_1169 | 0.45 | -0.5 | |
1,368,579 | - | Pf6N2E2_1169 | 0.45 | +2.1 | |
1,368,599 | + | Pf6N2E2_1169 | 0.49 | +0.5 | |
1,368,982 | + | +0.5 | |||
1,369,230 | + | +0.2 | |||
1,369,295 | + | +0.5 |
Or see this region's nucleotide sequence