Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2348

Experiment: Cobalt chloride 0.6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cobalt chloride 0.6 mM
2,784,068	-				+1.1
2,784,111	-				+1.3
2,784,112	+				+0.4
2,784,112	+				-0.9
2,784,112	+				-1.8
2,784,113	-				-0.5
2,784,113	-				+1.9
2,784,144	+				-0.1
2,784,144	+				-0.6
2,784,144	+				-0.2
2,784,145	-				+0.5
2,784,145	-				-0.1
2,784,181	+				+1.1
2,784,181	+				+0.1
2,784,181	+				+0.4
2,784,181	+				+1.5
2,784,182	-				-3.3
2,784,182	-				+0.1
2,784,182	-				-0.3
2,784,184	+				-1.1
2,784,185	-				-0.3
2,784,185	-				-0.6
2,784,219	-				+0.8
2,784,219	-				-0.9
2,784,341	+		Pf6N2E2_2348	0.13	-1.4
2,784,341	+		Pf6N2E2_2348	0.13	-2.5
2,784,342	-		Pf6N2E2_2348	0.13	-0.9
2,784,342	-		Pf6N2E2_2348	0.13	-0.2
2,784,342	-		Pf6N2E2_2348	0.13	-1.7
2,784,342	-		Pf6N2E2_2348	0.13	-0.2
2,784,347	+		Pf6N2E2_2348	0.13	+0.4
2,784,348	-		Pf6N2E2_2348	0.13	-1.1
2,784,392	+		Pf6N2E2_2348	0.16	+0.9
2,784,392	+		Pf6N2E2_2348	0.16	+1.3
2,784,392	+		Pf6N2E2_2348	0.16	-0.8
2,784,392	+		Pf6N2E2_2348	0.16	+1.5
2,784,393	-		Pf6N2E2_2348	0.16	+0.8
2,784,393	-		Pf6N2E2_2348	0.16	-0.3
2,784,393	-		Pf6N2E2_2348	0.16	-0.1
2,784,464	+		Pf6N2E2_2348	0.22	-1.0
2,784,465	-		Pf6N2E2_2348	0.22	+1.3
2,784,500	+		Pf6N2E2_2348	0.24	+0.7
2,784,500	+		Pf6N2E2_2348	0.24	+0.1
2,784,500	+		Pf6N2E2_2348	0.24	+0.1
2,784,512	+		Pf6N2E2_2348	0.25	+1.1
2,784,513	-		Pf6N2E2_2348	0.25	+0.8
2,784,513	-		Pf6N2E2_2348	0.25	-1.4
2,784,544	+		Pf6N2E2_2348	0.27	-0.4
2,784,544	+		Pf6N2E2_2348	0.27	-0.8
2,784,544	+		Pf6N2E2_2348	0.27	+0.2
2,784,544	+		Pf6N2E2_2348	0.27	-1.0
2,784,544	+		Pf6N2E2_2348	0.27	-0.6
2,784,544	+		Pf6N2E2_2348	0.27	+0.7
2,784,545	-		Pf6N2E2_2348	0.27	-0.7
2,784,545	-		Pf6N2E2_2348	0.27	+1.1
2,784,545	-		Pf6N2E2_2348	0.27	-0.5
2,784,545	-		Pf6N2E2_2348	0.27	-0.4
2,784,548	+		Pf6N2E2_2348	0.28	+0.1
2,784,548	+		Pf6N2E2_2348	0.28	-0.8
2,784,548	+		Pf6N2E2_2348	0.28	+1.4
2,784,548	+		Pf6N2E2_2348	0.28	-0.0
2,784,548	+		Pf6N2E2_2348	0.28	+0.3
2,784,548	+		Pf6N2E2_2348	0.28	-0.9
2,784,549	-		Pf6N2E2_2348	0.28	-1.5
2,784,549	-		Pf6N2E2_2348	0.28	+2.1
2,784,609	+		Pf6N2E2_2348	0.32	-1.5
2,784,609	+		Pf6N2E2_2348	0.32	-3.1
2,784,609	+		Pf6N2E2_2348	0.32	+0.1
2,784,610	-		Pf6N2E2_2348	0.32	-0.9
2,784,693	+		Pf6N2E2_2348	0.38	-1.8
2,784,693	+		Pf6N2E2_2348	0.38	-2.6
2,784,693	+		Pf6N2E2_2348	0.38	-0.6
2,784,789	+		Pf6N2E2_2348	0.45	+1.1
2,784,790	-		Pf6N2E2_2348	0.45	-0.5
2,784,790	-		Pf6N2E2_2348	0.45	+0.5
2,784,790	-		Pf6N2E2_2348	0.45	-1.7
2,784,811	+		Pf6N2E2_2348	0.47	-1.0
2,784,811	+		Pf6N2E2_2348	0.47	+0.5
2,784,812	-		Pf6N2E2_2348	0.47	-2.0
2,784,812	-		Pf6N2E2_2348	0.47	-0.2
2,785,013	-		Pf6N2E2_2348	0.62	-0.8
2,785,013	-		Pf6N2E2_2348	0.62	+0.7
2,785,028	-		Pf6N2E2_2348	0.63	-0.8
2,785,053	+		Pf6N2E2_2348	0.65	-2.8
2,785,053	+		Pf6N2E2_2348	0.65	-0.5
2,785,054	-		Pf6N2E2_2348	0.65	-1.2
2,785,054	-		Pf6N2E2_2348	0.65	+1.1
2,785,054	-		Pf6N2E2_2348	0.65	-0.7
2,785,217	+		Pf6N2E2_2348	0.77	+0.1
2,785,218	-		Pf6N2E2_2348	0.77	+1.1
2,785,218	-		Pf6N2E2_2348	0.77	-1.6
2,785,220	-		Pf6N2E2_2348	0.77	+0.7
2,785,220	-		Pf6N2E2_2348	0.77	-0.5
2,785,220	-		Pf6N2E2_2348	0.77	-0.4
2,785,289	+		Pf6N2E2_2348	0.82	-1.7
2,785,290	-		Pf6N2E2_2348	0.82	+0.3
2,785,290	-		Pf6N2E2_2348	0.82	+0.5
2,785,290	-		Pf6N2E2_2348	0.82	-1.1
2,785,290	-		Pf6N2E2_2348	0.82	-0.5
2,785,292	-		Pf6N2E2_2348	0.82	-0.8
2,785,315	-		Pf6N2E2_2348	0.84	-1.6
2,785,315	-		Pf6N2E2_2348	0.84	-0.7
2,785,355	+		Pf6N2E2_2348	0.87	+2.1
2,785,355	+		Pf6N2E2_2348	0.87	+1.1
2,785,355	+		Pf6N2E2_2348	0.87	+0.1
2,785,355	+		Pf6N2E2_2348	0.87	+0.1
2,785,356	-		Pf6N2E2_2348	0.87	-2.2
2,785,356	-		Pf6N2E2_2348	0.87	-0.8
2,785,449	-				+1.1
2,785,505	-				-0.2
2,785,549	-				-0.2
2,785,555	-				-0.6
2,785,555	-				-0.4
2,785,555	-				+1.3
2,785,559	-				+0.4
2,785,559	-				-1.0
2,785,559	-				-0.0
2,785,559	-				-0.7
2,785,559	-				+1.1
2,785,559	-				-1.2
2,785,642	+		Pf6N2E2_2349	0.16	+1.1
2,785,642	+		Pf6N2E2_2349	0.16	-0.9
2,785,643	-		Pf6N2E2_2349	0.16	-0.7
2,785,643	-		Pf6N2E2_2349	0.16	+3.7
2,785,643	-		Pf6N2E2_2349	0.16	-0.9
2,785,643	-		Pf6N2E2_2349	0.16	-0.3
2,785,646	+		Pf6N2E2_2349	0.17	+1.4
2,785,646	+		Pf6N2E2_2349	0.17	+0.9
2,785,647	-		Pf6N2E2_2349	0.17	+0.0
2,785,647	-		Pf6N2E2_2349	0.17	+1.7
2,785,693	-		Pf6N2E2_2349	0.28	+0.2
2,785,694	+		Pf6N2E2_2349	0.29	-0.0
2,785,694	+		Pf6N2E2_2349	0.29	+1.3
2,785,694	+		Pf6N2E2_2349	0.29	+0.3
2,785,694	+		Pf6N2E2_2349	0.29	-1.6
2,785,694	+		Pf6N2E2_2349	0.29	-1.7
2,785,694	+		Pf6N2E2_2349	0.29	+0.8
2,785,695	-		Pf6N2E2_2349	0.29	+1.7
2,785,695	-		Pf6N2E2_2349	0.29	-0.3
2,785,695	-		Pf6N2E2_2349	0.29	+0.5
2,785,695	-		Pf6N2E2_2349	0.29	-0.2
2,785,695	-		Pf6N2E2_2349	0.29	-0.2
2,785,695	-		Pf6N2E2_2349	0.29	-0.8
2,785,695	-		Pf6N2E2_2349	0.29	-0.2
2,785,695	-		Pf6N2E2_2349	0.29	+1.1
2,785,695	-		Pf6N2E2_2349	0.29	+0.3
2,785,738	+		Pf6N2E2_2349	0.39	-0.8
2,785,739	-		Pf6N2E2_2349	0.39	+0.7
2,785,739	-		Pf6N2E2_2349	0.39	-1.5
2,785,871	+		Pf6N2E2_2349	0.71	-1.7
2,785,871	+		Pf6N2E2_2349	0.71	+0.8
2,785,871	+		Pf6N2E2_2349	0.71	-0.5
2,785,871	+		Pf6N2E2_2349	0.71	+0.4
2,786,205	+		Pf6N2E2_2350	0.30	-0.7
2,786,205	+		Pf6N2E2_2350	0.30	+1.4
2,786,206	-		Pf6N2E2_2350	0.30	-0.1
2,786,223	+		Pf6N2E2_2350	0.32	-1.7
2,786,224	-		Pf6N2E2_2350	0.32	-1.0
2,786,224	-		Pf6N2E2_2350	0.32	+1.1