Experiment: Cobalt chloride 0.4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_830 and Pf6N2E2_831 are separated by 57 nucleotides Pf6N2E2_831 and Pf6N2E2_832 are separated by 48 nucleotides Pf6N2E2_832 and Pf6N2E2_833 are separated by 383 nucleotides
Pf6N2E2_830 - Long-chain fatty acid transport protein, at 968,049 to 969,320
_830
Pf6N2E2_831 - Ketoacyl reductase hetN (EC 1.3.1.-), at 969,378 to 970,163
_831
Pf6N2E2_832 - Outer membrane component of tripartite multidrug resistance system, at 970,212 to 971,675
_832
Pf6N2E2_833 - Probable Co/Zn/Cd efflux system membrane fusion protein, at 972,059 to 973,003
_833
Position (kb) 970
971
972 Strain fitness (log2 ratio) -2
-1
0
1
2 at 969.258 kb on + strand at 969.258 kb on + strand at 969.258 kb on + strand at 969.258 kb on + strand at 969.258 kb on + strand at 969.259 kb on - strand at 969.259 kb on - strand at 969.296 kb on + strand at 969.297 kb on - strand at 969.680 kb on - strand, within Pf6N2E2_831 at 969.697 kb on + strand, within Pf6N2E2_831 at 969.697 kb on + strand, within Pf6N2E2_831 at 969.698 kb on - strand, within Pf6N2E2_831 at 969.725 kb on - strand, within Pf6N2E2_831 at 970.087 kb on + strand at 970.195 kb on + strand at 970.196 kb on - strand at 970.391 kb on - strand, within Pf6N2E2_832 at 970.437 kb on + strand, within Pf6N2E2_832 at 970.717 kb on + strand, within Pf6N2E2_832 at 970.717 kb on + strand, within Pf6N2E2_832 at 970.718 kb on - strand, within Pf6N2E2_832 at 970.800 kb on + strand, within Pf6N2E2_832 at 970.801 kb on - strand, within Pf6N2E2_832 at 970.814 kb on + strand, within Pf6N2E2_832 at 970.999 kb on + strand, within Pf6N2E2_832 at 970.999 kb on + strand, within Pf6N2E2_832 at 970.999 kb on + strand, within Pf6N2E2_832 at 971.024 kb on - strand, within Pf6N2E2_832 at 971.082 kb on - strand, within Pf6N2E2_832 at 971.116 kb on + strand, within Pf6N2E2_832 at 971.116 kb on + strand, within Pf6N2E2_832 at 971.116 kb on + strand, within Pf6N2E2_832 at 971.116 kb on + strand, within Pf6N2E2_832 at 971.116 kb on + strand, within Pf6N2E2_832 at 971.116 kb on + strand, within Pf6N2E2_832 at 971.116 kb on + strand, within Pf6N2E2_832 at 971.116 kb on + strand, within Pf6N2E2_832 at 971.116 kb on + strand, within Pf6N2E2_832 at 971.117 kb on - strand, within Pf6N2E2_832 at 971.117 kb on - strand, within Pf6N2E2_832 at 971.117 kb on - strand, within Pf6N2E2_832 at 971.117 kb on - strand, within Pf6N2E2_832 at 971.117 kb on - strand, within Pf6N2E2_832 at 971.117 kb on - strand, within Pf6N2E2_832 at 971.117 kb on - strand, within Pf6N2E2_832 at 971.117 kb on - strand, within Pf6N2E2_832 at 971.117 kb on - strand, within Pf6N2E2_832 at 971.117 kb on - strand, within Pf6N2E2_832 at 971.263 kb on + strand, within Pf6N2E2_832 at 971.263 kb on + strand, within Pf6N2E2_832 at 971.263 kb on + strand, within Pf6N2E2_832 at 971.263 kb on + strand, within Pf6N2E2_832 at 971.264 kb on - strand, within Pf6N2E2_832 at 971.360 kb on + strand, within Pf6N2E2_832 at 971.360 kb on + strand, within Pf6N2E2_832 at 971.361 kb on - strand, within Pf6N2E2_832 at 971.534 kb on + strand at 971.602 kb on + strand at 971.603 kb on - strand at 971.646 kb on + strand at 971.762 kb on + strand at 971.763 kb on - strand at 971.763 kb on - strand at 971.772 kb on + strand at 971.893 kb on + strand at 971.893 kb on + strand at 971.893 kb on + strand at 971.893 kb on + strand at 971.893 kb on + strand at 971.894 kb on - strand at 971.894 kb on - strand at 971.894 kb on - strand at 971.894 kb on - strand at 971.894 kb on - strand at 971.894 kb on - strand at 971.894 kb on - strand at 971.894 kb on - strand at 972.399 kb on - strand, within Pf6N2E2_833 at 972.649 kb on + strand, within Pf6N2E2_833 at 972.650 kb on - strand, within Pf6N2E2_833 at 972.665 kb on + strand, within Pf6N2E2_833 at 972.666 kb on - strand, within Pf6N2E2_833
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.4 mM remove 969,258 + +0.6 969,258 + +0.6 969,258 + -0.5 969,258 + -0.4 969,258 + -0.1 969,259 - -0.9 969,259 - +0.1 969,296 + +0.2 969,297 - -1.9 969,680 - Pf6N2E2_831 0.38 +0.4 969,697 + Pf6N2E2_831 0.41 -0.4 969,697 + Pf6N2E2_831 0.41 +0.5 969,698 - Pf6N2E2_831 0.41 -0.4 969,725 - Pf6N2E2_831 0.44 +1.6 970,087 + -0.4 970,195 + +0.9 970,196 - -0.7 970,391 - Pf6N2E2_832 0.12 -0.1 970,437 + Pf6N2E2_832 0.15 +0.4 970,717 + Pf6N2E2_832 0.34 +0.3 970,717 + Pf6N2E2_832 0.34 -0.7 970,718 - Pf6N2E2_832 0.35 +0.1 970,800 + Pf6N2E2_832 0.40 +1.0 970,801 - Pf6N2E2_832 0.40 +1.1 970,814 + Pf6N2E2_832 0.41 +0.1 970,999 + Pf6N2E2_832 0.54 +0.6 970,999 + Pf6N2E2_832 0.54 +0.6 970,999 + Pf6N2E2_832 0.54 +0.2 971,024 - Pf6N2E2_832 0.55 +1.4 971,082 - Pf6N2E2_832 0.59 -0.4 971,116 + Pf6N2E2_832 0.62 +0.6 971,116 + Pf6N2E2_832 0.62 +0.5 971,116 + Pf6N2E2_832 0.62 +1.1 971,116 + Pf6N2E2_832 0.62 +0.2 971,116 + Pf6N2E2_832 0.62 +1.1 971,116 + Pf6N2E2_832 0.62 -0.9 971,116 + Pf6N2E2_832 0.62 +0.6 971,116 + Pf6N2E2_832 0.62 +0.5 971,116 + Pf6N2E2_832 0.62 -0.0 971,117 - Pf6N2E2_832 0.62 +0.9 971,117 - Pf6N2E2_832 0.62 -0.6 971,117 - Pf6N2E2_832 0.62 +1.6 971,117 - Pf6N2E2_832 0.62 +0.1 971,117 - Pf6N2E2_832 0.62 -0.7 971,117 - Pf6N2E2_832 0.62 +0.2 971,117 - Pf6N2E2_832 0.62 -0.0 971,117 - Pf6N2E2_832 0.62 +1.2 971,117 - Pf6N2E2_832 0.62 +1.6 971,117 - Pf6N2E2_832 0.62 -0.5 971,263 + Pf6N2E2_832 0.72 +1.0 971,263 + Pf6N2E2_832 0.72 +0.6 971,263 + Pf6N2E2_832 0.72 -0.4 971,263 + Pf6N2E2_832 0.72 +1.6 971,264 - Pf6N2E2_832 0.72 +0.6 971,360 + Pf6N2E2_832 0.78 +2.6 971,360 + Pf6N2E2_832 0.78 -0.4 971,361 - Pf6N2E2_832 0.78 +2.0 971,534 + -0.4 971,602 + -0.9 971,603 - +0.9 971,646 + +0.1 971,762 + +0.8 971,763 - -0.4 971,763 - +2.2 971,772 + +0.6 971,893 + +0.6 971,893 + +1.9 971,893 + -0.2 971,893 + -0.3 971,893 + +1.2 971,894 - +0.2 971,894 - -0.4 971,894 - +0.3 971,894 - +0.2 971,894 - -1.5 971,894 - +1.6 971,894 - -0.4 971,894 - +0.6 972,399 - Pf6N2E2_833 0.36 +2.2 972,649 + Pf6N2E2_833 0.62 +0.1 972,650 - Pf6N2E2_833 0.63 +0.6 972,665 + Pf6N2E2_833 0.64 -0.8 972,666 - Pf6N2E2_833 0.64 +0.6
Or see this region's nucleotide sequence