Experiment: Cobalt chloride 0.4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1329 and Pf6N2E2_1330 are separated by 145 nucleotides Pf6N2E2_1330 and Pf6N2E2_1331 are separated by 17 nucleotides
Pf6N2E2_1329 - Phenylacetaldehyde dehydrogenase (EC 1.2.1.39), at 1,563,377 to 1,564,864
_1329
Pf6N2E2_1330 - Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases, at 1,565,010 to 1,566,467
_1330
Pf6N2E2_1331 - General substrate transporter:Major facilitator superfamily, at 1,566,485 to 1,567,741
_1331
Position (kb)
1565
1566
1567 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1564.514 kb on + strand, within Pf6N2E2_1329 at 1564.514 kb on + strand, within Pf6N2E2_1329 at 1564.514 kb on + strand, within Pf6N2E2_1329 at 1564.514 kb on + strand, within Pf6N2E2_1329 at 1564.514 kb on + strand, within Pf6N2E2_1329 at 1564.514 kb on + strand, within Pf6N2E2_1329 at 1564.514 kb on + strand, within Pf6N2E2_1329 at 1564.515 kb on - strand, within Pf6N2E2_1329 at 1564.515 kb on - strand, within Pf6N2E2_1329 at 1564.515 kb on - strand, within Pf6N2E2_1329 at 1564.605 kb on - strand, within Pf6N2E2_1329 at 1564.829 kb on + strand at 1564.829 kb on + strand at 1564.829 kb on + strand at 1565.216 kb on - strand, within Pf6N2E2_1330 at 1565.327 kb on - strand, within Pf6N2E2_1330 at 1565.327 kb on - strand, within Pf6N2E2_1330 at 1565.327 kb on - strand, within Pf6N2E2_1330 at 1565.389 kb on + strand, within Pf6N2E2_1330 at 1565.497 kb on + strand, within Pf6N2E2_1330 at 1565.498 kb on - strand, within Pf6N2E2_1330 at 1565.646 kb on - strand, within Pf6N2E2_1330 at 1565.646 kb on - strand, within Pf6N2E2_1330 at 1565.717 kb on - strand, within Pf6N2E2_1330 at 1565.810 kb on + strand, within Pf6N2E2_1330 at 1566.462 kb on - strand at 1566.482 kb on - strand at 1566.482 kb on - strand at 1566.669 kb on + strand, within Pf6N2E2_1331 at 1566.669 kb on + strand, within Pf6N2E2_1331 at 1566.670 kb on - strand, within Pf6N2E2_1331 at 1566.670 kb on - strand, within Pf6N2E2_1331 at 1566.670 kb on - strand, within Pf6N2E2_1331 at 1566.682 kb on + strand, within Pf6N2E2_1331 at 1566.808 kb on - strand, within Pf6N2E2_1331 at 1566.808 kb on - strand, within Pf6N2E2_1331 at 1567.194 kb on + strand, within Pf6N2E2_1331 at 1567.195 kb on - strand, within Pf6N2E2_1331 at 1567.195 kb on - strand, within Pf6N2E2_1331 at 1567.323 kb on + strand, within Pf6N2E2_1331 at 1567.324 kb on - strand, within Pf6N2E2_1331 at 1567.447 kb on - strand, within Pf6N2E2_1331
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.4 mM remove 1,564,514 + Pf6N2E2_1329 0.76 +0.4 1,564,514 + Pf6N2E2_1329 0.76 -1.0 1,564,514 + Pf6N2E2_1329 0.76 -0.4 1,564,514 + Pf6N2E2_1329 0.76 +1.8 1,564,514 + Pf6N2E2_1329 0.76 +0.6 1,564,514 + Pf6N2E2_1329 0.76 -0.4 1,564,514 + Pf6N2E2_1329 0.76 +2.1 1,564,515 - Pf6N2E2_1329 0.76 +0.6 1,564,515 - Pf6N2E2_1329 0.76 -1.8 1,564,515 - Pf6N2E2_1329 0.76 +0.1 1,564,605 - Pf6N2E2_1329 0.83 -1.4 1,564,829 + -0.9 1,564,829 + +0.1 1,564,829 + -0.9 1,565,216 - Pf6N2E2_1330 0.14 -0.2 1,565,327 - Pf6N2E2_1330 0.22 -0.0 1,565,327 - Pf6N2E2_1330 0.22 +0.8 1,565,327 - Pf6N2E2_1330 0.22 +1.6 1,565,389 + Pf6N2E2_1330 0.26 -1.0 1,565,497 + Pf6N2E2_1330 0.33 -1.9 1,565,498 - Pf6N2E2_1330 0.33 +1.4 1,565,646 - Pf6N2E2_1330 0.44 +0.9 1,565,646 - Pf6N2E2_1330 0.44 +1.4 1,565,717 - Pf6N2E2_1330 0.48 +1.3 1,565,810 + Pf6N2E2_1330 0.55 +0.6 1,566,462 - +1.1 1,566,482 - +0.4 1,566,482 - -0.2 1,566,669 + Pf6N2E2_1331 0.15 -0.4 1,566,669 + Pf6N2E2_1331 0.15 -0.6 1,566,670 - Pf6N2E2_1331 0.15 -0.0 1,566,670 - Pf6N2E2_1331 0.15 -0.4 1,566,670 - Pf6N2E2_1331 0.15 -1.2 1,566,682 + Pf6N2E2_1331 0.16 -0.1 1,566,808 - Pf6N2E2_1331 0.26 -0.1 1,566,808 - Pf6N2E2_1331 0.26 -0.0 1,567,194 + Pf6N2E2_1331 0.56 +1.6 1,567,195 - Pf6N2E2_1331 0.56 -0.1 1,567,195 - Pf6N2E2_1331 0.56 -1.4 1,567,323 + Pf6N2E2_1331 0.67 +0.6 1,567,324 - Pf6N2E2_1331 0.67 -0.3 1,567,447 - Pf6N2E2_1331 0.77 +0.2
Or see this region's nucleotide sequence