Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS22950
Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
4,791,324 | - | BWI76_RS22945 | 0.10 | -0.2 | |
4,791,491 | + | BWI76_RS22945 | 0.25 | -0.3 | |
4,791,502 | + | BWI76_RS22945 | 0.26 | +0.0 | |
4,791,636 | + | BWI76_RS22945 | 0.38 | -2.8 | |
4,791,660 | + | BWI76_RS22945 | 0.41 | -3.2 | |
4,792,024 | + | BWI76_RS22945 | 0.74 | -0.7 | |
4,792,229 | + | -0.1 | |||
4,792,393 | - | BWI76_RS22950 | 0.22 | -1.2 | |
4,792,436 | - | BWI76_RS22950 | 0.33 | -1.1 | |
4,792,704 | - | +0.0 | |||
4,792,705 | - | +0.4 | |||
4,792,705 | - | -0.6 | |||
4,792,805 | - | +0.3 | |||
4,793,060 | + | BWI76_RS22955 | 0.37 | -1.8 | |
4,793,359 | + | BWI76_RS22955 | 0.69 | -0.6 | |
4,793,402 | - | BWI76_RS22955 | 0.74 | -1.0 | |
4,793,485 | + | BWI76_RS22955 | 0.83 | -0.3 | |
4,793,485 | + | BWI76_RS22955 | 0.83 | -1.3 | |
4,793,636 | - | +0.4 |
Or see this region's nucleotide sequence