Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS13995
Experiment: LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,922,966 | + | BWI76_RS13990 | 0.60 | +0.5 | |
2,923,183 | - | BWI76_RS13990 | 0.72 | -0.1 | |
2,923,518 | - | -2.6 | |||
2,924,282 | - | BWI76_RS13995 | 0.21 | -1.0 | |
2,924,454 | - | BWI76_RS13995 | 0.30 | -3.1 | |
2,924,576 | + | BWI76_RS13995 | 0.37 | -2.4 | |
2,924,944 | + | BWI76_RS13995 | 0.56 | +0.2 | |
2,925,323 | - | BWI76_RS13995 | 0.75 | -0.7 | |
2,925,419 | - | BWI76_RS13995 | 0.80 | -0.2 | |
2,925,519 | - | BWI76_RS13995 | 0.86 | -1.0 | |
2,926,067 | + | BWI76_RS14000 | 0.23 | +0.4 | |
2,926,339 | - | BWI76_RS14000 | 0.59 | +1.0 | |
2,926,343 | + | BWI76_RS14000 | 0.60 | +0.1 | |
2,926,523 | - | BWI76_RS14000 | 0.84 | +0.6 | |
2,926,570 | + | +0.8 |
Or see this region's nucleotide sequence