Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23685 and BWI76_RS23690 are separated by 1 nucleotides BWI76_RS23690 and BWI76_RS23695 are separated by 249 nucleotides
BWI76_RS23685: BWI76_RS23685 - MFS transporter, at 4,943,170 to 4,944,504
_RS23685
BWI76_RS23690: BWI76_RS23690 - putative glyoxalase/bleomycin resistance protein/dioxygenase, at 4,944,506 to 4,944,895
_RS23690
BWI76_RS23695: BWI76_RS23695 - deoxyribonyl-CoA synthetase <small>(from data)</small>, at 4,945,145 to 4,946,701
_RS23695
Position (kb) 4944
4945 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4943.523 kb on + strand, within BWI76_RS23685 at 4943.531 kb on - strand, within BWI76_RS23685 at 4943.531 kb on - strand, within BWI76_RS23685 at 4943.532 kb on - strand, within BWI76_RS23685 at 4943.552 kb on + strand, within BWI76_RS23685 at 4943.619 kb on - strand, within BWI76_RS23685 at 4943.806 kb on + strand, within BWI76_RS23685 at 4944.125 kb on - strand, within BWI76_RS23685 at 4944.176 kb on + strand, within BWI76_RS23685 at 4944.290 kb on + strand, within BWI76_RS23685 at 4944.290 kb on + strand, within BWI76_RS23685 at 4944.298 kb on - strand, within BWI76_RS23685 at 4944.345 kb on - strand, within BWI76_RS23685 at 4944.633 kb on + strand, within BWI76_RS23690 at 4944.682 kb on + strand, within BWI76_RS23690 at 4944.957 kb on + strand at 4944.965 kb on - strand at 4945.069 kb on - strand at 4945.185 kb on + strand at 4945.303 kb on + strand, within BWI76_RS23695 at 4945.323 kb on - strand, within BWI76_RS23695 at 4945.347 kb on - strand, within BWI76_RS23695 at 4945.423 kb on + strand, within BWI76_RS23695 at 4945.424 kb on - strand, within BWI76_RS23695 at 4945.493 kb on + strand, within BWI76_RS23695 at 4945.501 kb on - strand, within BWI76_RS23695 at 4945.734 kb on + strand, within BWI76_RS23695
Per-strain Table
Position Strand Gene LocusTag Fraction LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL remove 4,943,523 + BWI76_RS23685 0.26 +0.1 4,943,531 - BWI76_RS23685 0.27 +0.3 4,943,531 - BWI76_RS23685 0.27 +0.1 4,943,532 - BWI76_RS23685 0.27 +0.1 4,943,552 + BWI76_RS23685 0.29 -0.7 4,943,619 - BWI76_RS23685 0.34 +0.1 4,943,806 + BWI76_RS23685 0.48 +1.0 4,944,125 - BWI76_RS23685 0.72 -1.3 4,944,176 + BWI76_RS23685 0.75 +0.5 4,944,290 + BWI76_RS23685 0.84 -2.0 4,944,290 + BWI76_RS23685 0.84 +0.3 4,944,298 - BWI76_RS23685 0.84 +0.1 4,944,345 - BWI76_RS23685 0.88 +0.8 4,944,633 + BWI76_RS23690 0.33 -1.0 4,944,682 + BWI76_RS23690 0.45 -2.1 4,944,957 + -0.9 4,944,965 - -1.7 4,945,069 - -0.1 4,945,185 + +0.2 4,945,303 + BWI76_RS23695 0.10 +0.2 4,945,323 - BWI76_RS23695 0.11 -1.3 4,945,347 - BWI76_RS23695 0.13 +1.8 4,945,423 + BWI76_RS23695 0.18 -1.0 4,945,424 - BWI76_RS23695 0.18 -2.5 4,945,493 + BWI76_RS23695 0.22 +0.4 4,945,501 - BWI76_RS23695 0.23 +1.7 4,945,734 + BWI76_RS23695 0.38 -0.8
Or see this region's nucleotide sequence