Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12960
Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,701,122 | + | BWI76_RS12955 | 0.72 | +1.4 | |
2,701,268 | - | BWI76_RS12955 | 0.77 | -0.8 | |
2,701,638 | - | BWI76_RS12955 | 0.89 | -0.5 | |
2,701,645 | + | BWI76_RS12955 | 0.89 | +0.8 | |
2,701,853 | - | +0.6 | |||
2,701,935 | + | +0.2 | |||
2,702,072 | + | -1.9 | |||
2,702,080 | - | +2.0 | |||
2,702,497 | + | +1.3 | |||
2,702,575 | + | -2.0 | |||
2,702,583 | + | +0.7 | |||
2,702,583 | + | +1.6 | |||
2,702,590 | + | +0.3 | |||
2,702,591 | - | +0.0 | |||
2,702,779 | + | -1.7 | |||
2,702,779 | + | -1.1 | |||
2,703,053 | - | BWI76_RS12965 | 0.31 | +1.0 | |
2,703,123 | + | BWI76_RS12965 | 0.39 | -0.7 | |
2,703,151 | + | BWI76_RS12965 | 0.43 | +1.2 | |
2,703,169 | + | BWI76_RS12965 | 0.45 | +1.0 | |
2,703,194 | - | BWI76_RS12965 | 0.47 | +0.4 | |
2,703,338 | - | BWI76_RS12965 | 0.64 | +1.1 | |
2,703,491 | - | BWI76_RS12965 | 0.82 | +0.6 |
Or see this region's nucleotide sequence