Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09895
Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,081,051 | + | BWI76_RS09890 | 0.74 | +0.7 | |
2,081,126 | - | BWI76_RS09890 | 0.77 | +0.1 | |
2,081,147 | + | BWI76_RS09890 | 0.78 | +1.2 | |
2,081,175 | - | BWI76_RS09890 | 0.79 | -0.6 | |
2,081,224 | - | BWI76_RS09890 | 0.81 | -1.5 | |
2,081,510 | + | +1.8 | |||
2,081,555 | - | +0.7 | |||
2,081,584 | + | +0.4 | |||
2,081,723 | - | -0.5 | |||
2,081,834 | + | -0.5 | |||
2,082,191 | + | BWI76_RS09895 | 0.52 | +0.0 | |
2,082,191 | + | BWI76_RS09895 | 0.52 | -0.4 | |
2,082,522 | - | +0.2 | |||
2,082,679 | + | BWI76_RS09900 | 0.15 | -0.5 | |
2,082,746 | + | BWI76_RS09900 | 0.24 | +2.2 | |
2,082,824 | + | BWI76_RS09900 | 0.34 | -1.6 | |
2,082,824 | + | BWI76_RS09900 | 0.34 | +0.9 | |
2,083,022 | + | BWI76_RS09900 | 0.59 | +0.1 | |
2,083,086 | + | BWI76_RS09900 | 0.67 | +0.9 | |
2,083,155 | - | BWI76_RS09900 | 0.76 | -0.1 | |
2,083,381 | + | +1.0 | |||
2,083,462 | + | -0.2 | |||
2,083,470 | - | BWI76_RS09905 | 0.11 | -0.1 |
Or see this region's nucleotide sequence