Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS01795
Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL |
|---|---|---|---|---|---|
| remove | |||||
| 365,661 | + | BWI76_RS01790 | 0.39 | -0.5 | |
| 365,689 | - | BWI76_RS01790 | 0.41 | +0.1 | |
| 365,694 | - | BWI76_RS01790 | 0.42 | -0.1 | |
| 365,790 | + | BWI76_RS01790 | 0.49 | -0.6 | |
| 365,860 | - | BWI76_RS01790 | 0.54 | +1.7 | |
| 365,908 | + | BWI76_RS01790 | 0.58 | -0.4 | |
| 365,916 | - | BWI76_RS01790 | 0.58 | -1.0 | |
| 365,916 | - | BWI76_RS01790 | 0.58 | +0.1 | |
| 366,119 | - | BWI76_RS01790 | 0.73 | -1.3 | |
| 366,166 | + | BWI76_RS01790 | 0.77 | -0.1 | |
| 366,234 | + | BWI76_RS01790 | 0.82 | -0.7 | |
| 366,242 | - | BWI76_RS01790 | 0.82 | -0.5 | |
| 366,253 | + | BWI76_RS01790 | 0.83 | +0.1 | |
| 366,418 | + | -0.3 | |||
| 366,663 | + | BWI76_RS01795 | 0.17 | -0.5 | |
| 366,681 | + | BWI76_RS01795 | 0.22 | -1.0 | |
| 366,801 | + | BWI76_RS01795 | 0.55 | -0.9 | |
| 366,931 | + | -0.3 | |||
| 366,938 | - | -0.5 | |||
| 366,990 | - | +0.7 | |||
| 367,238 | + | -0.3 | |||
| 367,265 | + | -1.2 | |||
| 367,443 | - | BWI76_RS01800 | 0.12 | +0.1 | |
| 367,532 | + | BWI76_RS01800 | 0.17 | -0.9 | |
| 367,566 | - | BWI76_RS01800 | 0.19 | +1.1 | |
| 367,772 | - | BWI76_RS01800 | 0.32 | -2.2 |
Or see this region's nucleotide sequence