Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18240
Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
3,789,109 | + | +0.5 | |||
3,789,429 | + | BWI76_RS18235 | 0.42 | +1.0 | |
3,789,542 | - | BWI76_RS18235 | 0.56 | +0.1 | |
3,789,645 | - | BWI76_RS18235 | 0.69 | -0.1 | |
3,789,754 | + | BWI76_RS18235 | 0.83 | -1.3 | |
3,789,811 | - | BWI76_RS18235 | 0.90 | -0.2 | |
3,789,961 | - | +1.4 | |||
3,790,092 | - | -0.1 | |||
3,790,596 | + | BWI76_RS18240 | 0.55 | -1.3 | |
3,790,603 | - | BWI76_RS18240 | 0.56 | -1.8 | |
3,791,010 | - | +0.4 | |||
3,791,276 | - | BWI76_RS18245 | 0.15 | +0.5 | |
3,791,276 | - | BWI76_RS18245 | 0.15 | -0.1 | |
3,791,298 | + | BWI76_RS18245 | 0.17 | -0.7 | |
3,791,303 | + | BWI76_RS18245 | 0.17 | +0.2 | |
3,791,306 | - | BWI76_RS18245 | 0.17 | +0.4 | |
3,791,387 | - | BWI76_RS18245 | 0.22 | +1.0 | |
3,791,438 | + | BWI76_RS18245 | 0.26 | +0.3 | |
3,791,446 | + | BWI76_RS18245 | 0.26 | +0.2 | |
3,791,555 | - | BWI76_RS18245 | 0.34 | +1.0 | |
3,791,555 | - | BWI76_RS18245 | 0.34 | +0.6 | |
3,791,567 | - | BWI76_RS18245 | 0.34 | +0.5 | |
3,791,684 | + | BWI76_RS18245 | 0.42 | -2.0 | |
3,791,909 | + | BWI76_RS18245 | 0.57 | +0.6 |
Or see this region's nucleotide sequence