Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15660
Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
3,272,345 | - | BWI76_RS15655 | 0.33 | -0.0 | |
3,272,599 | - | BWI76_RS15655 | 0.51 | -3.0 | |
3,272,599 | - | BWI76_RS15655 | 0.51 | +1.4 | |
3,272,633 | - | BWI76_RS15655 | 0.53 | -1.1 | |
3,272,936 | + | BWI76_RS15655 | 0.73 | -0.8 | |
3,272,993 | + | BWI76_RS15655 | 0.77 | -0.9 | |
3,273,020 | - | BWI76_RS15655 | 0.79 | +0.1 | |
3,273,088 | + | BWI76_RS15655 | 0.84 | -1.4 | |
3,273,123 | + | BWI76_RS15655 | 0.86 | -1.3 | |
3,273,196 | + | +0.0 | |||
3,273,209 | - | +0.6 | |||
3,273,415 | + | BWI76_RS15660 | 0.20 | -1.2 | |
3,273,809 | + | -0.0 | |||
3,273,817 | - | -0.9 | |||
3,273,817 | - | -0.4 | |||
3,273,867 | - | -2.4 | |||
3,273,918 | - | BWI76_RS15665 | 0.14 | -0.3 | |
3,274,043 | - | BWI76_RS15665 | 0.33 | -0.6 | |
3,274,069 | + | BWI76_RS15665 | 0.37 | +0.1 | |
3,274,327 | + | BWI76_RS15665 | 0.77 | +0.0 | |
3,274,458 | + | +0.4 | |||
3,274,487 | - | -0.7 | |||
3,274,489 | - | -0.9 | |||
3,274,494 | - | +1.5 | |||
3,274,621 | + | -0.1 |
Or see this region's nucleotide sequence