Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15550

Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
3,255,979	+		BWI76_RS15535	0.89	-1.0
3,255,987	-				-0.9
3,256,015	+				-1.7
3,256,131	+		BWI76_RS15540	0.21	-0.8
3,256,328	+		BWI76_RS15540	0.62	-1.9
3,256,375	-		BWI76_RS15540	0.72	-0.4
3,256,428	+		BWI76_RS15540	0.83	-0.1
3,256,433	+		BWI76_RS15540	0.84	-1.9
3,256,433	+		BWI76_RS15540	0.84	+0.6
3,256,441	-		BWI76_RS15540	0.86	-0.6
3,256,450	+		BWI76_RS15540	0.88	-1.0
3,256,623	-				-1.6
3,256,664	+		BWI76_RS15545	0.14	-2.5
3,256,693	+		BWI76_RS15545	0.24	-0.2
3,256,708	-		BWI76_RS15545	0.29	+0.1
3,256,796	+		BWI76_RS15545	0.60	-0.0
3,256,836	+		BWI76_RS15545	0.74	+0.4
3,256,944	+				+0.7
3,257,091	-				+0.1
3,257,216	-				-0.5
3,257,334	+		BWI76_RS15550	0.14	+0.4
3,257,404	-		BWI76_RS15550	0.17	-0.4
3,257,587	+		BWI76_RS15550	0.24	+0.2
3,257,632	-		BWI76_RS15550	0.26	-0.4
3,257,632	-		BWI76_RS15550	0.26	-2.2
3,257,697	-		BWI76_RS15550	0.28	-0.6
3,258,102	-		BWI76_RS15550	0.43	-1.9
3,258,148	+		BWI76_RS15550	0.45	-0.6
3,258,510	+		BWI76_RS15550	0.59	-1.6
3,258,621	-		BWI76_RS15550	0.63	-2.2
3,258,627	+				+2.2
3,258,663	-		BWI76_RS15550	0.64	-0.7
3,258,663	-		BWI76_RS15550	0.64	-3.5
3,258,729	+		BWI76_RS15550	0.67	-0.3
3,258,729	+		BWI76_RS15550	0.67	+0.7
3,258,860	+		BWI76_RS15550	0.72	+1.2
3,258,873	+		BWI76_RS15550	0.72	-0.8
3,259,002	+		BWI76_RS15550	0.77	-0.1
3,259,088	+		BWI76_RS15550	0.80	-1.1
3,259,106	-		BWI76_RS15550	0.81	-1.3
3,259,151	-		BWI76_RS15550	0.83	-0.2
3,259,174	-		BWI76_RS15550	0.84	-0.8
3,259,255	+		BWI76_RS15550	0.87	-2.0
3,259,333	+		BWI76_RS15550	0.89	-0.6
3,259,362	+				-0.9
3,259,362	+				-2.2
3,259,370	-				-0.5
3,259,370	-				-1.5
3,259,370	-				-1.5
3,259,390	+				+0.4
3,259,399	-				-0.2
3,259,414	-				+0.6
3,259,418	+				-0.1
3,259,425	+				+0.9
3,259,426	-				-1.7
3,259,449	+				-0.4
3,259,449	+				-0.4
3,259,457	-				-0.2
3,259,457	-				-0.6
3,259,457	-				+0.2
3,259,480	+				-0.9
3,259,535	+				-0.6
3,259,535	+				-1.3
3,259,535	+				+0.4
3,259,543	-				+0.3
3,259,606	+				-1.9
3,259,607	+				+1.2
3,259,608	+				+0.0
3,259,608	+				-0.2
3,259,689	+				-2.2
3,259,708	-				-0.5
3,259,749	+				+1.4
3,259,757	-		BWI76_RS15555	0.11	-0.3
3,259,757	-		BWI76_RS15555	0.11	-0.9
3,259,757	-		BWI76_RS15555	0.11	-0.1
3,259,757	-		BWI76_RS15555	0.11	-1.1
3,259,757	-		BWI76_RS15555	0.11	-3.0
3,259,765	-		BWI76_RS15555	0.13	-1.0
3,259,776	-		BWI76_RS15555	0.15	-1.3
3,259,776	-		BWI76_RS15555	0.15	-0.4
3,259,790	-		BWI76_RS15555	0.18	-0.8
3,259,848	-		BWI76_RS15555	0.31	+0.4
3,259,889	-		BWI76_RS15555	0.39	-0.2
3,259,891	+		BWI76_RS15555	0.40	-2.7
3,259,901	-		BWI76_RS15555	0.42	+0.1
3,259,935	-		BWI76_RS15555	0.49	-0.2
3,259,985	-		BWI76_RS15555	0.60	-1.2
3,260,007	-		BWI76_RS15555	0.64	+0.0
3,260,007	-		BWI76_RS15555	0.64	-3.5
3,260,024	-		BWI76_RS15555	0.68	-2.2
3,260,024	-		BWI76_RS15555	0.68	-0.3
3,260,043	-		BWI76_RS15555	0.72	-2.4
3,260,069	+		BWI76_RS15555	0.77	-1.4
3,260,077	-		BWI76_RS15555	0.79	-0.9
3,260,077	-		BWI76_RS15555	0.79	-1.2
3,260,184	-				-0.6
3,260,184	-				-1.1
3,260,241	-		BWI76_RS15560	0.21	-2.5
3,260,248	+		BWI76_RS15560	0.23	-2.1
3,260,256	-		BWI76_RS15560	0.26	+0.1
3,260,256	-		BWI76_RS15560	0.26	-1.5
3,260,267	-		BWI76_RS15560	0.29	-1.7
3,260,269	+		BWI76_RS15560	0.29	-0.9
3,260,311	-		BWI76_RS15560	0.42	-2.4
3,260,339	+		BWI76_RS15560	0.50	+0.6
3,260,339	+		BWI76_RS15560	0.50	-0.1
3,260,339	+		BWI76_RS15560	0.50	+0.2
3,260,339	+		BWI76_RS15560	0.50	-0.9
3,260,339	+		BWI76_RS15560	0.50	-1.5
3,260,339	+		BWI76_RS15560	0.50	-0.4
3,260,347	-		BWI76_RS15560	0.53	-2.6
3,260,347	-		BWI76_RS15560	0.53	-0.4
3,260,347	-		BWI76_RS15560	0.53	-0.2
3,260,347	-		BWI76_RS15560	0.53	-1.8
3,260,347	-		BWI76_RS15560	0.53	-0.6
3,260,347	-		BWI76_RS15560	0.53	-0.5
3,260,348	-		BWI76_RS15560	0.53	-1.6
3,260,496	-				-0.7
3,260,552	-				-0.3
3,260,583	-				-2.4