Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS13785
Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,873,948 | - | BWI76_RS13780 | 0.54 | -1.8 | |
2,874,219 | - | BWI76_RS13780 | 0.71 | -1.4 | |
2,874,222 | + | BWI76_RS13780 | 0.71 | +0.5 | |
2,874,256 | + | BWI76_RS13780 | 0.73 | +1.1 | |
2,874,256 | + | BWI76_RS13780 | 0.73 | +0.3 | |
2,874,266 | + | BWI76_RS13780 | 0.74 | -0.6 | |
2,874,278 | - | BWI76_RS13780 | 0.74 | +0.7 | |
2,874,387 | - | BWI76_RS13780 | 0.81 | +1.7 | |
2,874,987 | - | BWI76_RS13785 | 0.35 | -0.5 | |
2,875,108 | + | BWI76_RS13785 | 0.50 | -1.5 | |
2,875,640 | - | BWI76_RS13790 | 0.11 | +0.3 | |
2,875,700 | - | BWI76_RS13790 | 0.18 | +0.8 | |
2,875,855 | + | BWI76_RS13790 | 0.34 | +0.7 | |
2,875,877 | + | BWI76_RS13790 | 0.36 | -0.1 | |
2,875,877 | + | BWI76_RS13790 | 0.36 | +1.1 | |
2,875,885 | - | BWI76_RS13790 | 0.37 | -0.0 | |
2,875,885 | - | BWI76_RS13790 | 0.37 | -0.1 | |
2,875,994 | + | BWI76_RS13790 | 0.49 | -1.5 | |
2,876,486 | + | -0.6 | |||
2,876,494 | - | +0.5 |
Or see this region's nucleotide sequence