Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS13435
Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,801,855 | - | -0.5 | |||
2,802,065 | - | -1.2 | |||
2,802,194 | - | -1.9 | |||
2,802,210 | + | +1.1 | |||
2,802,210 | + | +0.4 | |||
2,802,210 | + | -0.0 | |||
2,802,210 | + | +0.8 | |||
2,802,210 | + | -0.5 | |||
2,802,218 | - | -0.8 | |||
2,802,218 | - | +0.1 | |||
2,802,218 | - | -1.5 | |||
2,802,218 | - | +0.6 | |||
2,802,232 | + | -1.8 | |||
2,802,245 | + | -1.5 | |||
2,802,245 | + | -0.2 | |||
2,802,245 | + | -0.5 | |||
2,802,253 | - | -2.0 | |||
2,802,260 | - | +0.7 | |||
2,802,265 | + | -0.7 | |||
2,802,265 | + | -0.0 | |||
2,802,273 | - | +1.1 | |||
2,802,405 | + | -0.1 | |||
2,802,406 | - | -1.8 | |||
2,802,406 | - | -0.3 | |||
2,802,455 | - | +1.1 | |||
2,802,470 | - | -1.5 | |||
2,802,482 | - | +1.1 | |||
2,802,658 | + | BWI76_RS13430 | 0.56 | +0.1 | |
2,802,898 | - | BWI76_RS13435 | 0.68 | -1.7 | |
2,802,957 | + | +1.1 | |||
2,802,968 | + | -1.2 | |||
2,803,061 | + | +0.3 | |||
2,803,388 | + | +0.7 | |||
2,803,593 | - | BWI76_RS13445 | 0.29 | -1.2 | |
2,803,782 | - | BWI76_RS13445 | 0.53 | +0.2 |
Or see this region's nucleotide sequence