Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12855
Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,678,783 | + | BWI76_RS12850 | 0.25 | -0.6 | |
2,678,928 | - | BWI76_RS12850 | 0.36 | +0.4 | |
2,678,950 | + | BWI76_RS12850 | 0.38 | +0.6 | |
2,679,059 | - | BWI76_RS12850 | 0.47 | +0.7 | |
2,679,126 | + | BWI76_RS12850 | 0.52 | +0.2 | |
2,679,228 | - | BWI76_RS12850 | 0.60 | -0.3 | |
2,679,241 | + | BWI76_RS12850 | 0.61 | +0.5 | |
2,679,249 | - | BWI76_RS12850 | 0.62 | -0.6 | |
2,679,347 | + | BWI76_RS12850 | 0.69 | -0.1 | |
2,679,389 | - | BWI76_RS12850 | 0.73 | +1.0 | |
2,679,769 | - | -0.3 | |||
2,679,837 | - | BWI76_RS12855 | 0.19 | -1.2 | |
2,680,044 | + | BWI76_RS12855 | 0.66 | -2.9 | |
2,680,303 | + | BWI76_RS12860 | 0.17 | -0.4 | |
2,680,518 | - | BWI76_RS12860 | 0.49 | +0.1 | |
2,681,019 | - | BWI76_RS12865 | 0.14 | -0.0 | |
2,681,110 | - | BWI76_RS12865 | 0.22 | +0.9 |
Or see this region's nucleotide sequence