Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12375
Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
2,584,559 | - | BWI76_RS12370 | 0.61 | -0.5 | |
2,584,563 | + | BWI76_RS12370 | 0.61 | -0.6 | |
2,584,564 | - | BWI76_RS12370 | 0.61 | +0.3 | |
2,584,773 | - | BWI76_RS12370 | 0.72 | -1.8 | |
2,584,773 | - | BWI76_RS12370 | 0.72 | +0.5 | |
2,584,965 | - | BWI76_RS12370 | 0.82 | -0.1 | |
2,585,108 | + | BWI76_RS12370 | 0.89 | +0.7 | |
2,585,211 | + | -0.3 | |||
2,585,536 | + | BWI76_RS12375 | 0.23 | -2.1 | |
2,585,614 | - | BWI76_RS12375 | 0.38 | -0.1 | |
2,585,644 | - | BWI76_RS12375 | 0.43 | -1.6 | |
2,585,800 | + | BWI76_RS12375 | 0.71 | -4.0 | |
2,586,058 | - | -0.6 | |||
2,586,071 | + | +1.2 | |||
2,586,188 | - | -1.0 | |||
2,586,460 | - | -2.3 | |||
2,586,478 | + | +0.5 | |||
2,586,505 | + | BWI76_RS12380 | 0.14 | -0.2 | |
2,586,547 | - | BWI76_RS12380 | 0.24 | -1.3 | |
2,586,570 | - | BWI76_RS12380 | 0.29 | -3.7 | |
2,586,582 | + | BWI76_RS12380 | 0.32 | -1.1 | |
2,586,687 | + | BWI76_RS12380 | 0.57 | -0.1 | |
2,586,758 | + | BWI76_RS12380 | 0.74 | +0.1 | |
2,586,764 | + | BWI76_RS12380 | 0.75 | -0.3 | |
2,586,825 | - | -0.9 | |||
2,586,827 | + | -0.8 |
Or see this region's nucleotide sequence