Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS00115
Experiment: LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL |
---|---|---|---|---|---|
remove | |||||
21,459 | + | BWI76_RS00110 | 0.45 | -1.6 | |
21,538 | + | BWI76_RS00110 | 0.51 | +0.4 | |
21,578 | - | BWI76_RS00110 | 0.54 | -0.3 | |
21,737 | + | BWI76_RS00110 | 0.65 | -0.2 | |
21,957 | - | BWI76_RS00110 | 0.82 | +0.4 | |
22,121 | - | +0.4 | |||
22,125 | - | -1.0 | |||
22,130 | - | -0.5 | |||
22,416 | - | -0.6 | |||
22,506 | - | BWI76_RS00115 | 0.21 | -0.9 | |
22,559 | - | BWI76_RS00115 | 0.29 | +0.2 | |
22,675 | - | -0.6 | |||
22,686 | + | BWI76_RS00115 | 0.48 | -0.4 | |
22,694 | - | BWI76_RS00115 | 0.50 | -0.5 | |
22,854 | - | BWI76_RS00115 | 0.74 | -0.9 | |
22,890 | - | BWI76_RS00115 | 0.79 | -1.7 | |
23,039 | + | -1.3 | |||
23,076 | - | -0.0 | |||
23,081 | - | +0.9 | |||
23,133 | + | +0.4 | |||
23,170 | - | BWI76_RS00120 | 0.13 | -0.2 | |
23,386 | - | BWI76_RS00120 | 0.43 | +1.0 | |
23,386 | - | BWI76_RS00120 | 0.43 | -0.8 | |
23,448 | + | BWI76_RS00120 | 0.51 | +0.9 | |
23,562 | + | BWI76_RS00120 | 0.67 | +0.3 | |
23,636 | + | BWI76_RS00120 | 0.77 | -0.6 | |
23,705 | - | BWI76_RS00120 | 0.86 | +1.0 | |
23,732 | + | BWI76_RS00120 | 0.90 | +1.6 | |
23,743 | - | +0.1 | |||
23,846 | - | +0.7 | |||
23,997 | - | BWI76_RS00125 | 0.11 | +0.6 | |
23,998 | - | BWI76_RS00125 | 0.12 | +0.7 |
Or see this region's nucleotide sequence